Gene YpAngola_A0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0439 
Symbol 
ID5798903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp461298 
End bp462320 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content51% 
IMG OID641338445 
ProductNi2+-Co2+ transporter (NiCoT) family protein 
Protein accessionYP_001605044 
Protein GI162421402 
COG category[R] General function prediction only 
COG ID[COG2215] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000891132 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0000143481 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGTAG TTATTGCTCC GATTCCACGG CCCAAACAGC GACATTGGCT GATCAATTTA 
TGGCCTCTAT TGTTGTTCTT ACTCATATTG GCTAGCGCTG GGTATGTCTC CTGGCTTTAT
TGGCCAGAAT TGCTGTTTAA AACAGTAGCC TGGCAAAAAA GTGTGCATCA GCAAATGGCC
CAACTGTTGC AGCAAGTTAA AGCCGAACCG CATCAGGCGG GGTGGGTGCT GATGTTGTTT
AGCCTGATTT ATGGCGTGTT ACATGCTGTA GGGCCGGGCC ACGGTAAAGT GGTGATTGTG
ACGTATCTGG CAACCCACCC GGCGCGGTTA AAAAGCAGCC TGAAACTGAC TTTTGCCGCT
TCAATATTGC AAGGTAGCGT AGCGATTCTA CTGGTAACTT TGTTACTTGG GGTATGGCAG
CTCTCTTCAC GGTATCTGCA TCAAAGCAGT TTTTGGCTAG AAAAAGGCAG TTTTCTATTG
GTTATTGGGT TGGGGATGTT GCTCTGTTTC CGGGCGGTAA AGCGGATCTA TCGACAAATT
AACGCCTTAA AACCACAGAA AATGACTTTT CAGCAGATTC AGCCATTACC GGCTAACCAT
GTGCACAGCG ACAACTGCGG CTGTGGGCAC CGTCATCTGC CCAGTGATAA AGAGCTACAA
GCCGGTGGCG ATTGGCGCAC CCGTTTGACG ATTGTATTGG CGATGGGGAT GCGCCCTTGC
TCCGGTGCGA TTATGGTGTT GCTGTTTTCC AAGGTGATTG GCGTTTACTG GTGGGGGATT
TTGTCGGCGA TGGCGATGGC TTTAGGGACG TCGCTGACTA TCTCGCTGTT GGCACTGTTC
GTCCATTATG CACGGCGCTT GGCGGTATAT TTAAGCCGTA AACGCGCCCC TGCCGCTTGG
GGAGAGATTG CCTGGGCCAC GCTGGCATTA ACCGGGGGAA TTATTCTGCT GTTCGCGGGG
GTTCTGTTTT ATTTGTCCAG TCAGCCGGAG ATGGTTGGGG CTGTTCGTCC ATTTGGTCGC
TGA
 
Protein sequence
MSVVIAPIPR PKQRHWLINL WPLLLFLLIL ASAGYVSWLY WPELLFKTVA WQKSVHQQMA 
QLLQQVKAEP HQAGWVLMLF SLIYGVLHAV GPGHGKVVIV TYLATHPARL KSSLKLTFAA
SILQGSVAIL LVTLLLGVWQ LSSRYLHQSS FWLEKGSFLL VIGLGMLLCF RAVKRIYRQI
NALKPQKMTF QQIQPLPANH VHSDNCGCGH RHLPSDKELQ AGGDWRTRLT IVLAMGMRPC
SGAIMVLLFS KVIGVYWWGI LSAMAMALGT SLTISLLALF VHYARRLAVY LSRKRAPAAW
GEIAWATLAL TGGIILLFAG VLFYLSSQPE MVGAVRPFGR