Gene YpAngola_A0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0437 
Symbol 
ID5798901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp459504 
End bp460277 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content50% 
IMG OID641338443 
ProductRNA methyltransferase 
Protein accessionYP_001605042 
Protein GI162420842 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.293753 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0000675678 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTACACA ACATTCGTAT TGTCTTGGTT GAAACTTCAC ACACCGGCAA CATGGGCTCG 
ACCGCCAGAG CCATGAAAAC AATGGGATTA ACCAATCTAT ATTTGGTTAA TCCATTGGTA
AAACCAGATT CTCAGGCCAT TGCTTTGTCA GCCGGTGCCA GTGATGTTAT TGGTAAGGCG
ACTATCGTTG ATACGTTAGA TGAAGCCCTT GCCGGATGTA GTTTGGTGGT CGGCACCAGC
GCCCGTTCCA GAACGTTACC TTGGCCAATG CTGGAACCGC GTGAATGCGG TGTACGCAGT
GCGCGCGAAG CTGAACATGC TCCGGTTGCC TTGGTGTTTG GTCGCGAGCG TGTTGGCCTG
ACTAACGACG AGCTGCAAAA ATGCCATTAT CATGTGGCTA TCCCCGCCAA TCCTGAATAT
AGCTCCTTAA ATTTAGCCAT GGCCGTGCAA ATTTTGGCTT ATGAAGTGCG GGTGGCATAC
CTTGATCGTC AGCAGGCAAA TGCCCCTGTA GAAGAAGAGG AAGAGGCACC TTATCCTTTG
GTGGATGATC TGGAGCGTTT CTATCAGCAT TTGGAGCAGG TTTTGTCTCA TAGTGGCTTT
ATCCGCCAGG CCCATCCGGG CCAGATTATG AGCAAATTAA GGCGCCTCTT TACCCGCGCT
CGGCCCGAGG CTCAAGAGCT GAATATTCTA CGTGGGATGC TGACATCCAT CGAAAAGCAG
GATAAATATC CACAACGCGG TACCGGTGAT ACGGCGGGTA AGAGTAAGGA TTAA
 
Protein sequence
MLHNIRIVLV ETSHTGNMGS TARAMKTMGL TNLYLVNPLV KPDSQAIALS AGASDVIGKA 
TIVDTLDEAL AGCSLVVGTS ARSRTLPWPM LEPRECGVRS AREAEHAPVA LVFGRERVGL
TNDELQKCHY HVAIPANPEY SSLNLAMAVQ ILAYEVRVAY LDRQQANAPV EEEEEAPYPL
VDDLERFYQH LEQVLSHSGF IRQAHPGQIM SKLRRLFTRA RPEAQELNIL RGMLTSIEKQ
DKYPQRGTGD TAGKSKD