Gene YpAngola_A0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A0352 
SymbolhisQ 
ID5798816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp365022 
End bp365708 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content49% 
IMG OID641338360 
Producthistidine transport system permease HisQ 
Protein accessionYP_001604960 
Protein GI162418808 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4215] ABC-type arginine transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.179299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGATG GATATTCCAA ACTGATATTT GAAGGTGCGC TGGTGACACT GGAGTTAGCA 
TTGTTCTCGG TGCTGCTGTC AGTGGTTATC GGCTTGATGG GGGCCGGTGG CAAGTTATCG
TCAAACCGGT TGGTATCGGG CTTGTTTGAG TGCTACACCA CACTGATCCG TGGCGTACCT
GATTTGGTTT TGATGCTGCT TATCTTCTAC GGTTTGCAGA TTACCCTCAA TAGCATTACC
GAGTCCCTTG GTTTTGTACA AATTGATATT GACCCTCTCT CTGCCGGGGT TATCACCCTT
GGCTTTATCT ATGGCGCTTA CTTCACTGAA ACGTTTCGTG GCGCTTATAT GGCGGTCTCT
AAAGGGCAAA TTGAGGCCGC GACGGCCTTT GGTTTTACCT CCAGCCAGAT CTTTCGTCGC
ATTATGTTCC CAGCCATGAT GCGCTATGCG TTGCCGGGCA TCGGTAATAA TTGGCAAGTG
ATCCTGAAAG CGACGGCGCT GGTGTCAATT TTAGGCTTGA ATGACGTGGT CAAAGCCACC
CAATTGGCGG GAAAAGGCAC TTATCAGCCG TTTTTCTTTG CTTTGGTTGC TGGTGCGATT
TATCTGTTCT TTACCACTCT CTCTAACGGT GTCTTGTGGT GGCTGGAAAG GCGCTATTCC
CATGGGGTGA AGAGGGCTGA GCTATGA
 
Protein sequence
MLDGYSKLIF EGALVTLELA LFSVLLSVVI GLMGAGGKLS SNRLVSGLFE CYTTLIRGVP 
DLVLMLLIFY GLQITLNSIT ESLGFVQIDI DPLSAGVITL GFIYGAYFTE TFRGAYMAVS
KGQIEAATAF GFTSSQIFRR IMFPAMMRYA LPGIGNNWQV ILKATALVSI LGLNDVVKAT
QLAGKGTYQP FFFALVAGAI YLFFTTLSNG VLWWLERRYS HGVKRAEL