Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A0250 |
Symbol | |
ID | 5798714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 260986 |
End bp | 262092 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641338264 |
Product | fimbrial family protein |
Protein accession | YP_001604870 |
Protein GI | 162419400 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.319484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.000123535 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAAAAA ATATATTCCT CACGTTACGC AGTGAGAGGT ATAAGGCGGG ACTGCTGTTG TTGCTGCTAC TCCTGTTATG TACCACCAGT AAACCGAGTT TTGCCGCACT GCAAGTTAAC TCTTGTTCTC TTGCTGTATC GGGGGCCGGA GGGGAAACAC CGTTTGTCAT AAAAGCACTG CCAGTCACGT TGACGAATGG TTTTGTCTTG GGGAGCATGA ACTTCAGTGT CGTCACGACA TTCACAAAAA CAGGGACGAC AGCAGATTAT TTATACCTCG GTGGTTGGTC GATGCTTGCT GGGGGGGCGG TTATGCCTGT TTCTACCGGT GTTCCAGGGG TGAAGATGTC GGTGAATGTC AGTGACGCTT TATTCGGGGG ATATGAATGG GGGAATACAG AGAAGGCAAC TCAGTCCTTG TTTGTACCAG GGACAAAAAT AACGATTGCT AATCGAGTCA CGGTCCAACT CATTGTGACT GATGCCAGTG TTTATCAAGG GGGAGTGATT AATTGGTTTA ATGTGGCGAG AAGTTTTGCG TTAGTTTCAG GTAATGCTCA GGTCTGGTCG ACTAAAAGTG TTGCTACTGG TGGCTCACGT TGTGGGGATA TGGTGACTTT TAATATCGGG TCAACAAATA TCGTATTGCC ACCTCCCACT GTGGCGACGT GTGATCTGGG GGCGACCGAT ATTGTGGTTG CACTGGACCC GATTGATACC TCTTCCCTAC AAACGCAAGG TGACCGGGCG GGCGGACAAG CTTTTTCGAT CCCACTGGGC AGTTGCGCTA AAGATGCTAA ACCCTATATC ACTTTTACCG ACAGTAGTAA CAAGGCTAAC CGTACCAATA TACTGAGTTT ATCACCGAGC AGCACGGCGA CCGGTGTGGG CCTTGTGCTT GAAAAAAGTG ACGGCAATCT GGTGACATTT GGCGCAGAAA ACGCCAGTGT CAGCGCCAGT AATGTGGGGC AATTTTTGAT TGGTACCTCA ACTGCCGCAG GAGGGAGCAT GCCTTTAAAT CTAACGGCTC GCTATATTCG CGCTGAAGGG GTGTTAAAGA GCGGTAATGT GAAAGCGGAT GCAATCTTTA CCGTCGCCTA CCCTTAA
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Protein sequence | MKKNIFLTLR SERYKAGLLL LLLLLLCTTS KPSFAALQVN SCSLAVSGAG GETPFVIKAL PVTLTNGFVL GSMNFSVVTT FTKTGTTADY LYLGGWSMLA GGAVMPVSTG VPGVKMSVNV SDALFGGYEW GNTEKATQSL FVPGTKITIA NRVTVQLIVT DASVYQGGVI NWFNVARSFA LVSGNAQVWS TKSVATGGSR CGDMVTFNIG STNIVLPPPT VATCDLGATD IVVALDPIDT SSLQTQGDRA GGQAFSIPLG SCAKDAKPYI TFTDSSNKAN RTNILSLSPS STATGVGLVL EKSDGNLVTF GAENASVSAS NVGQFLIGTS TAAGGSMPLN LTARYIRAEG VLKSGNVKAD AIFTVAYP
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