| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0138 |
|---|
| Symbol | |
|---|
| ID | 5798602 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 138018 |
|---|
| End bp | 138746 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641338161 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001604768 |
|---|
| Protein GI | 162421828 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
|---|
| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0131746 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATCCA TATCCAACTC CTGGGTCCAT ATGAGTACTA TCCAACAGAA TCTACAGGAT
GTCAGAGCGC GGATCGCAAC GGCTGCACAC AATTGCGGGC GCTCTCCAGA AGAAGTTACA
TTGCTTGCAG TCAGTAAAAC CAAACCTGTG GCGGCTATCG AAAAAGCCAT CGCCGCTGGG
CAATATGCTT TTGGTGAAAA CTATGTGCAG GAAGGGGTGG ATAAAATTCA CTCCTTCGTG
GATAACAAAA CGCTTGAATG GCACTTTATC GGGCCGCTGC AATCCAATAA AAGCCGGTTA
GTGGCTGAAA ATTTTGCCTG GTGTCATACC GTTGATCGGT TGAAAATAGC CCAGCGTCTG
AGTGCCCAGC GCCCAGCGGC TATGCCAGCG TTAAACGTAC TGATTCAGAT TAATATCAGT
GATGAGCAAA GCAAAGCGGG GATTTCCTTG AGTGAACTCC CCGCCTTGGC TGACAGCATT
AGTACATTAC CTAACCTGTG TTTACGCGGG CTGATGGCTA TCCCAGCGCC AGAACATGAT
TATCAGCGGC AATTGGCCGT ATTTACGCAA ATGAATCAGG CGTTCTTGAC TTTAAAAGCC
CGCTACCCTC AGATAGATAC ACTTTCTATG GGGATGACTG ATGATATGGA CGCCGCCATT
AGCGCCGGCA GTACACTGGT TCGAATTGGT ACCGCCATTT TTGGTGCCCG CGTTTATAAC
GCGGATTAA
|
|---|
| Protein sequence | MKSISNSWVH MSTIQQNLQD VRARIATAAH NCGRSPEEVT LLAVSKTKPV AAIEKAIAAG
QYAFGENYVQ EGVDKIHSFV DNKTLEWHFI GPLQSNKSRL VAENFAWCHT VDRLKIAQRL
SAQRPAAMPA LNVLIQINIS DEQSKAGISL SELPALADSI STLPNLCLRG LMAIPAPEHD
YQRQLAVFTQ MNQAFLTLKA RYPQIDTLSM GMTDDMDAAI SAGSTLVRIG TAIFGARVYN
AD
|
|---|
| |