| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0004 |
|---|
| Symbol | yieM |
|---|
| ID | 5798466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | - |
|---|
| Start bp | 2525 |
|---|
| End bp | 3991 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641338031 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001604649 |
|---|
| Protein GI | 162419510 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2425] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.729255 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGTC TGGCAACACT GGATATGCTG CTGTCGATAA GTGAAGGTGA ACTTATCGAA
GAGATGGTGG TAGGTTTACT GGCAGCACCT CAGTTGGCGA TTTTTTTTGA AAAATTCCCG
CGGATTAAAC GGGCATTAAT GAAAGATATT CCCGGCTGGA AACAAAATTT GCAACAACGG
ATCCGTGAAG CTAGCGTTCC GCCAGGGCTG GCGAATGAAT TTTCCTTATA TCAACAGAGT
CTGTTGGAGG ATAGCCCACA GTTTTATGCG CATCTGCCCG ATATCGTGGC TCAGTTACAA
GATTTACATT CCCCGTTTGC AACGCAGGCT AAAACATTAG TGCAAACCGC AGACCTGGCA
AAAAACCCGC CAGGCGGAGA TAGCCTGCAA ACGCTCTTTT TACAACGTTG GCGTGTCAGT
CTGATCCTAC AAACCATCAC AATTCATCAT CAGTTGTTAG AACAAGAACG GGAACAGCTC
TTAGCTGAGC TACAGCGAAG ATTAGCGCTC AGTGGTGCAC TGGAACCCAT TCTCACCACC
AATGACAATG CCGCTGGGCG TCTTTGGGAT ATGAGTCAGG GGCATTTGCA ACGTGGCGAT
TATCAATTAT TGCTGCAATA TGGCGACTTT CTGCAACAGC AACCTGAATT AATACGTTTA
GCCGAACAGC TCGGCCGCAG CCGCTCAGCC AAAGCACAAC CGGCACCTGA CGCCCGCTAT
GAGCCTTACA CCGTTATGGT ACGCCAGCCA GATTCGGTGC CTGAGGAGGT CAGTGGTATT
CATCAGAGTA ATGACATCCT GCGATTATTG CCTACTGAAT TGGTGATGTT AGGGATGAGT
GAGTTGGAGT TTGAGTTTTA TCGCCGCTTA CTGGAACGGC GTTTGCTCAC ATACCGATTA
CAAGGAGACA ACTGGCAGGA AAAAACGCAA CAGAGACCCG TCAGCCTTAA ACAAAATGAT
GAGCAACCCC GTGGGCCATT TATTGTCTGC GTCGATACCT CAGGCTCGAT GGGAGGCTTC
AACGAGCAAT GCGCCAAAGC ATTTTGTCTG GCCTTACTCC GTATCGCGTT AGCCGATAAT
CGCCGCTGTT ACATCATGTT ATTTGCTACT GAAATAATTC ACTACGAGCT ATCAGCTGAC
AATGGTATTG AGCAAGCCAT ACGTTTCCTC AACCAACATT TTCGTGGTGG TACGGATCTG
GCGGCATGCT TAGCCAACAC GTTAAATAAA ATGGAAGACA GAGAATGGTA TGACGCAGAC
GCGGTGATCA TTTCAGACTT TATCGCCCAG CGTTTGCCAG AAGAGTTAGT CAGAAAGATA
AAAATCCAGC AGCAGGCCCA CCAGCACCGT TTCCATGCTG TTGCCATGTC CGCTTATGGC
AAACCAGGGA TCATGCGTAT TTTTGATCAT ATCTGGCGTT TTGATACAAG TTTAAAAAGC
CGTTTGATAC GCCGCTGGAA ACGATAA
|
|---|
| Protein sequence | MLSLATLDML LSISEGELIE EMVVGLLAAP QLAIFFEKFP RIKRALMKDI PGWKQNLQQR
IREASVPPGL ANEFSLYQQS LLEDSPQFYA HLPDIVAQLQ DLHSPFATQA KTLVQTADLA
KNPPGGDSLQ TLFLQRWRVS LILQTITIHH QLLEQEREQL LAELQRRLAL SGALEPILTT
NDNAAGRLWD MSQGHLQRGD YQLLLQYGDF LQQQPELIRL AEQLGRSRSA KAQPAPDARY
EPYTVMVRQP DSVPEEVSGI HQSNDILRLL PTELVMLGMS ELEFEFYRRL LERRLLTYRL
QGDNWQEKTQ QRPVSLKQND EQPRGPFIVC VDTSGSMGGF NEQCAKAFCL ALLRIALADN
RRCYIMLFAT EIIHYELSAD NGIEQAIRFL NQHFRGGTDL AACLANTLNK MEDREWYDAD
AVIISDFIAQ RLPEELVRKI KIQQQAHQHR FHAVAMSAYG KPGIMRIFDH IWRFDTSLKS
RLIRRWKR
|
|---|
| |