| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_0139 |
|---|
| Symbol | |
|---|
| ID | 5798365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010158 |
|---|
| Strand | + |
|---|
| Start bp | 112524 |
|---|
| End bp | 114533 |
|---|
| Gene Length | 2010 bp |
|---|
| Protein Length | 669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641338027 |
|---|
| Product | ParB domain-containing protein |
|---|
| Protein accession | YP_001604644 |
|---|
| Protein GI | 162417859 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 248 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 244 |
|---|
| Fosmid unclonability p-value | 0.0000818484 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTAA CCGATGTTAA AGCAAAAGCC CCCAAAAAAG CGAGCAGCAA AAAAATCACG
AAGGCGCAGG AAGAAGCTCT GAAAGCCGCC CTTGAGGCCG CTGTCATCGA GTATGTTCCG
CTGTCCAGTC TCGCTAAATC CCCGCTGAAC GTGCGCACTA TCCCGTATTC CGTGGACAGC
GTTCGCGGTC TGGCTGACTC CATCGAGGCG CTCGGACTGC TGCAGAACCT GATTGTTCAC
ACCCTCGCGG ACGGACAATC CGGCGTGGCC GCAGGTGGTC GCCGACTGAC TGCCCTGAAT
CTGCTGGCGC AGGAAGATCG TCTTGCGGCT GATCATACCG TCATGGTGAA GCGAGTCTCA
GACGACATTG CGGCCCTCGC CTCGGTTGCC GAGAACGAGC AGCGCGCCGC CATGCATCCC
GCCGAGCAAA TCGCAGGTTT CCGTACGCTG GCAGAGCAGG GCAAAACTCC CGCACAGATT
GGCGACGCCC TCGGCTTCGG CTCCCGCCAC GTGCAGCGCA TGCTGAAGCT GGCAAACCTC
GCCCCGTCCC TGATGGAGAA GCTCGCGCAG GACGAACTGA CCGTTGAGCA GTGTCAGGCG
CTCTGTCTCG AGGACGATCC TGCCCGTCAG GTCGAGGTAT TCGAAAACGT GAAGGCCAGC
TGGTCGAACG CGCCCGCACA CCTGATTAAA CGCGCTATTA CCGAAACCGA GATGCGCACC
GACAACGCCA AATTTCGTTT TATCGGGCGC GATGCCTACG AGGCAGCAGG GGGTTACGTC
CGTGAAGATC TGTTCAGCCA GGACGAGGGC GACGGCACGG CAGACAGCGT GCTGGTTGAG
CGTCTGGTGC AGGAGAAGCT GGAGCGTATC GCGCAGGACA TTCAGCAGCG GGAGGGCTGG
GCATGGAGTC GCGGACGCGC AGCCCGCATC TGGTACCACG GCGAAGACGG TAAGGAGTTC
GTGCAGCCTG TTGAACCCGA TCCGGTGTAC ACCCCTGAGC AGCAGCAGCG TCTTGATGCG
CTGCGGGAGC AGTACGATAC ATATGACAGC GTTTGCGACG AATCAGATGC GATCGAAGCG
GACATCCTCG CCATTCAGGA GGCGGCAGAA GCCAGCGCGT GGACTGACGA CATGAAGTCA
GGCGCGGGAG TGATGGTCAG CCTGTACGAA GGGCAGGTGT ACGTGCAGCG CGGTGTGCGC
CTGAAAGCGG ATATGCCGGA AGAAACCGTA ACCAGCAGCG TAACGGTGCC ATTCACCTCA
CGCCAGCCCG ACGCCGCAGA GGGGATCAAC GTTCCGCTGC TCACTAAAAT GACCTCCGAG
CGTACGCTGG CAGTACAGGC GGCGCTGATG CAGCAGCCCG AAAAAGCGGT GGCGCTGATG
GTCTGGCGCA TGTGTACCTG CGTCTTCTCG GGCTGTCTGA CCACGACGCA CCCGTTCCGT
ATCAGTCTGA CCGTGTCCCA CGGCAGCCTG ACGGAGAACG CCCCGTCCGG TAAGGATGGC
GCAGCGTTTG AGATGCTCAT GACCGAACGG GCAAGGCTGA AAGCCCTGCT GCCGGAAGGG
TGGGAGAAGG ACTTCACCAC CTTCTTTGCC CTTGACGGCG GGGTGTTGAT GTCGCTGATG
GCCTTCTGCA CGGCCTGTTC CGTGGACGGG GTACAGACCC GCGATATGGG GCACACCTCC
CGAAGTCCAC TCGATACGGT CGAGGCGGCA ATCGGATTCC ACCTGCGCGA CTGGTGGCAG
CCGACGAAGG ACAACTATTT CGGTAGCCTG AAACATCCGC AGATTGTGGC CTCCCTGAAA
GAGGCGGGGC TGACGGGCGC GGCGGGTGAC GCGGAGAAGA TGAAGAAGGG CGATGCAGCA
GCGCATGCGG AGCACTTTAT GCAGCACACC CGCTGGGTTC CGGCATGGCT GAAAGGACCA
GAGCCAGCGG CTGAATCCGG TGCTGACGAC GCGGTTTCCG ATACCGACAG CACTGACAAC
GACACCACCA ACACGGCACA CGCCGCCTGA
|
|---|
| Protein sequence | MSVTDVKAKA PKKASSKKIT KAQEEALKAA LEAAVIEYVP LSSLAKSPLN VRTIPYSVDS
VRGLADSIEA LGLLQNLIVH TLADGQSGVA AGGRRLTALN LLAQEDRLAA DHTVMVKRVS
DDIAALASVA ENEQRAAMHP AEQIAGFRTL AEQGKTPAQI GDALGFGSRH VQRMLKLANL
APSLMEKLAQ DELTVEQCQA LCLEDDPARQ VEVFENVKAS WSNAPAHLIK RAITETEMRT
DNAKFRFIGR DAYEAAGGYV REDLFSQDEG DGTADSVLVE RLVQEKLERI AQDIQQREGW
AWSRGRAARI WYHGEDGKEF VQPVEPDPVY TPEQQQRLDA LREQYDTYDS VCDESDAIEA
DILAIQEAAE ASAWTDDMKS GAGVMVSLYE GQVYVQRGVR LKADMPEETV TSSVTVPFTS
RQPDAAEGIN VPLLTKMTSE RTLAVQAALM QQPEKAVALM VWRMCTCVFS GCLTTTHPFR
ISLTVSHGSL TENAPSGKDG AAFEMLMTER ARLKALLPEG WEKDFTTFFA LDGGVLMSLM
AFCTACSVDG VQTRDMGHTS RSPLDTVEAA IGFHLRDWWQ PTKDNYFGSL KHPQIVASLK
EAGLTGAAGD AEKMKKGDAA AHAEHFMQHT RWVPAWLKGP EPAAESGADD AVSDTDSTDN
DTTNTAHAA
|
|---|
| |