Gene YPK_4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_4235 
Symbol 
ID6090105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4674512 
End bp4675228 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content44% 
IMG OID641599334 
Producttranscriptional regulator PhoU 
Protein accessionYP_001722944 
Protein GI170026439 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATC TAAATAAACA TATTTCCGGC CAGTTCAATG CAGAACTTGA ACATATCCGC 
ACCCAAGTTT TAACTATGGG GGGGTTGGTG GAACAACAAT TATCTGATGC GATCACCGCC
ATGCATAATC AAGATGGCGA GCTGGCAAAG CGGGTAATTG ATGGGGATGA AAAGGTCAAT
ATGATGGAAG TGGCCATTGA TGAAGCCTGT GTGCGCATCA TTGCCAAACG TCAGCCAACA
GCCAGTGATC TACGGTTAGT CATGGCTATC ATTAAGACCA TTTCCGAATT AGAGCGTATT
GGTGATGTGG CAGATAAAAT CTGCCGCACA GCATTGGAAA AATTCTCTCA TCAACATCAA
CCGCTATTGG TCAGCCTAGA GTCTTTGGGG CGTCATACGG TGCAAATGCT ACATGATGTC
TTGGATGCAT TCGCTCGGAT GGATCTGGAT GAAGCTATCC GGATTTATCG TGAAGACAGA
AAGGTCGATC AAGAATATGA AGGCATTGTA CGTCAATTGA TGACATATAT GATGGAAGAT
CCGCGAACTA TCCCAAGTGT GTTAACTGCG TTGTTTTGTG CTCGTTCCAT TGAACGTATT
GGTGACCGCT GTCAGAATAT TTGCGAGTTT ATCTTCTACT TTGTTAAAGG GCATGACTTC
CGCCACCTTG GTGGTGATGA CTTAGAGAAG TTACTCTCTG GTAAGCCTGA AAAATAA
 
Protein sequence
MDNLNKHISG QFNAELEHIR TQVLTMGGLV EQQLSDAITA MHNQDGELAK RVIDGDEKVN 
MMEVAIDEAC VRIIAKRQPT ASDLRLVMAI IKTISELERI GDVADKICRT ALEKFSHQHQ
PLLVSLESLG RHTVQMLHDV LDAFARMDLD EAIRIYREDR KVDQEYEGIV RQLMTYMMED
PRTIPSVLTA LFCARSIERI GDRCQNICEF IFYFVKGHDF RHLGGDDLEK LLSGKPEK