Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4188 |
Symbol | |
ID | 6088815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4619216 |
End bp | 4621039 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641599287 |
Product | GTP-binding protein TypA |
Protein accession | YP_001722900 |
Protein GI | 170026395 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.428207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATCGAGA ATCTGCGTAA CATCGCCATT ATTGCGCACG TTGACCATGG GAAAACTACC CTGGTTGATA AGTTGCTACA ACAATCTGGT ACTTTCGGTG AACGTACTGA AGCAACTGAA CGTGTAATGG ACTCCAACGA TTTGGAGAAA GAGCGTGGGA TAACCATCCT CGCAAAAAAT ACTGCCATTA ATTGGAAAGA CTACCGCATC AACATCGTTG ATACCCCAGG GCACGCCGAT TTCGGCGGTG AGGTTGAGCG TGTAATGTCT ATGGTTGACT CTGTGCTGTT GGTCGTCGAC GCAATGGATG GCCCAATGCC GCAGACCCGT TTCGTGACCA AAAAAGCCTT TGCTCATGGT CTGAAACCTA TCGTGGTTAT CAACAAAGTT GACCGTCCTG GCGCGCGCCC TGACTGGGTT GTGGATCAGG TGTTTGACCT GTTCGTTAAC CTGGATGCGA CCGACGAACA ACTGGACTTC CCTATCATCT ATGCATCTGC ATTGATGGGT ATCGCGGGTG AAGACCACAA TGATATGGCA GAGGATATGA CCCCGCTGTA TCAGGCGATT ATTGACCATG TTCCTGCTCC TGATGTAGAC AGTTCTGGTC CGTTGCAGAT GCAAATCTCC CAACTGGATT ACAACAACTA CGTGGGTGTC ATCGGTATCG GCCGGATCAA ACGTGGTATT GTTAAGCCTA ATCAGCAAGT TACTGTTATC GATAGCGAAG GTAAGACCCG CAACGGTAAA GTGGGCAAAG TACTGGGCCA TATGGGTCTG GAACGAATCG AAACTACTCA GGCAGAAGCT GGCGACATCG TTGCTATCAC CGGCCTGGGC GAGTTGAACA TCTCTGACAC TATCTGTGAT GTGAATGCGG TTGAAGCATT GCCACCACTG TCTGTTGATG AACCAACGGT AACCATGTAT TTCTGCGTTA ACACCTCTCC GTTCTGTGGT AAAGAAGGTA AGTATGTGAC TTCACGTCAG ATTCTTGACC GTCTGAACAA AGAGTTGATC CATAACGTAG CTCTACGTGT TGAAGAAACG GAAGATGCTG ATGCATTCCG TGTATCAGGC CGTGGTGAAC TTCACCTGTC AGTTCTGATC GAAAACATGC GTCGTGAAGG TTTCGAGCTG GCTGTTTCTC GTCCTAAAGT TATCAACCGT ATTATCGACG GTCGCAATCA AGAACCTTTT GAAAGCGTAA CGCTGGATAT CGAAGAGCAG CACCAGGGCG CAGTAATGCA AGCCATGGGT GAGCGTAAAG GTGACGTGAA GGACATGATC CCAGACGGCA AAGGTCGTAT TCGTCTGGAT TATATGATCC CAAGCCGTGG CCTGATTGGC TTCCGTACTG AATTCATGAC CATGACTTCT GGTACTGGCC TGCTGTACTC CACATTCAGT CATTATGATG ATGTGCGTCC AGGTGATATC GGCCAACGCC AAAACGGCGT GCTGATCTCT AATGGCCAGG GTAAAGCGGT TGCGTTCGCA TTGTACAAAC TGCAAGATCG CGGCAAGCTG TTCATCGGTC ACGGTACAGA AGTGTATGAA GGCCAGATCA TCGGTATTCA CTCACGTTCT AATGACCTGA CGGTAAACTG CCTGACAGGT AAGCAGCTGA CTAACATGCG TGCATCCGGT ACTGACGAAG CAACCACTTT GGTTCCTTTC CTCAAGAAAA CGTTGGAACA GGCACTGGAA TTCATCGATG ACGATGAATT GGTAGAAGTT ACCCCGCAAT CAATCCGTAT TCGTAAGCGT CACCTGACGG AAAACGATCG TAAGCGTGCT GGACGTGGTC CAAGAGAAGG TTAA
|
Protein sequence | MIENLRNIAI IAHVDHGKTT LVDKLLQQSG TFGERTEATE RVMDSNDLEK ERGITILAKN TAINWKDYRI NIVDTPGHAD FGGEVERVMS MVDSVLLVVD AMDGPMPQTR FVTKKAFAHG LKPIVVINKV DRPGARPDWV VDQVFDLFVN LDATDEQLDF PIIYASALMG IAGEDHNDMA EDMTPLYQAI IDHVPAPDVD SSGPLQMQIS QLDYNNYVGV IGIGRIKRGI VKPNQQVTVI DSEGKTRNGK VGKVLGHMGL ERIETTQAEA GDIVAITGLG ELNISDTICD VNAVEALPPL SVDEPTVTMY FCVNTSPFCG KEGKYVTSRQ ILDRLNKELI HNVALRVEET EDADAFRVSG RGELHLSVLI ENMRREGFEL AVSRPKVINR IIDGRNQEPF ESVTLDIEEQ HQGAVMQAMG ERKGDVKDMI PDGKGRIRLD YMIPSRGLIG FRTEFMTMTS GTGLLYSTFS HYDDVRPGDI GQRQNGVLIS NGQGKAVAFA LYKLQDRGKL FIGHGTEVYE GQIIGIHSRS NDLTVNCLTG KQLTNMRASG TDEATTLVPF LKKTLEQALE FIDDDELVEV TPQSIRIRKR HLTENDRKRA GRGPREG
|
| |