Gene YPK_3935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3935 
Symbolfre 
ID6088674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4341944 
End bp4342645 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content49% 
IMG OID641599029 
ProductFMN reductase 
Protein accessionYP_001722651 
Protein GI170026146 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism 
COG ID[COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACTT TAAGCTGTAA AGTAACCTCC GTAGAGGCCA TTACCGATAC GGTGTACCGG 
GTGCAATTGG TACCTGAATC TTCTTTTTCT TTCCGCGCCG GGCAGTATTT GATGGTAGTG
ATGGATGAGC GTGATAAGCG CCCATTCTCG ATGGCTTCCA CACCGTTTCA GCAGGACTTT
ATCGAGTTAC ATATCGGTGC TTCGGAGCTG AATTTGTACG CAATGGCAGT GATGGATCGC
ATCCTAAAAG AGAAAAAACT GGATGTTGAT ATTCCTCATG GAGATGCCTG GTTCCGTGAA
GGGAGCAAGC GTCCGTTGGT TCTTATTGCT GGCGGTACTG GCTTCTCTTA TGCGCGATCC
ATCTTGTTAG CCGCGTTAGC GGAACAACCT GATCGCGAAG TCTCTATCTA TTGGGGCGGG
CGCGAAGCGG TACACCTGTA TGATTTAGGT GAGTTGGAAG CACTATCGAT TAAGTATCCG
CAACTGAAAG TCATTCCCGT AGTAGAACAA CCGGAAGAGG GTTGGCGTGG GCGCACAGGG
ACTGTACTGA GTGCTGTACT ACAAGATTAC GGTTCTTTAG CTGAGCAGGA TATTTACATC
GCGGGGCGTT TTGAAATGGC TAAAATCGCC CGTGAGCGTT TTTGTGTGGA GCGTGGCGCA
CAGGAAGAAC ATATCTTTGG TGATGCTTTT GCCTTTATCT AA
 
Protein sequence
MTTLSCKVTS VEAITDTVYR VQLVPESSFS FRAGQYLMVV MDERDKRPFS MASTPFQQDF 
IELHIGASEL NLYAMAVMDR ILKEKKLDVD IPHGDAWFRE GSKRPLVLIA GGTGFSYARS
ILLAALAEQP DREVSIYWGG REAVHLYDLG ELEALSIKYP QLKVIPVVEQ PEEGWRGRTG
TVLSAVLQDY GSLAEQDIYI AGRFEMAKIA RERFCVERGA QEEHIFGDAF AFI