| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3900 |
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| Symbol | |
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| ID | 6089037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4301505 |
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| End bp | 4302299 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641598992 |
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| Product | type III secretion protein SpaR/YscT/HrcT |
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| Protein accession | YP_001722618 |
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| Protein GI | 170026113 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4791] Type III secretory pathway, component EscT |
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| TIGRFAM ID | [TIGR01401] type III secretion protein SpaR/YscT/HrcT |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.772614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGACG TCCTCCCCGG TCTGACCGCA CTCGCATTAG CCATGATGCG GCCCTACGGT
ATCTTACTGA TATTACCGCT GTTTACCGCC CGCAGTTTGG GGAGCAGCTT ATTGCGTAAT
GGCTTGATTG TTGCCATCGC GCTGCCGGTC ACGCCGCTAT TTTTATCCGC ACCCATCATC
ACCAATAGTA GCCCGGTCAC TTGGATTGGG GTGTTATGCA CGGAGCTACT CATTGGGGTG
GTGATGGGGT TTGTCGCCGC ATTGCCTTTC TGGGCTATGA ATATGGCGGG TTTCCTGATC
GATACCTTAC GCGGGGCAAC GATGTCCACG TTGTTTAACC CCGGTATGGG CGTCGAATCC
TCCCTTTTTG GTGTGCTGTT TACCCAAATA TTAACGGTAC TGTTCCTGAT TTCTGGCGGT
TTTAATCAGG TGTTGGCGGC GTTGTACGGC TCGTACGATA GCTTACCCAT CGGCCAGGGT
ATCCAGCCTG CTGCAGATCT ATTGCTCTTT CTGCAAACTG AGTGGCAGAT GATGTTCGAG
CTTTGCTTGT GCTTTGCCCT ACCGGCACTG CTGGTCATGG TGTTGGCTGA TCTCTCTTTA
GGATTAATTA ACCGCTCGGC CCGGCAACTG AATGTCTTTT TTCTGGCGAT GCCCATTAAA
AGCGCACTGG CGCTTTTTCT CTTACTGATC AGCCTGCCTT ATGGCCTGCA TCACTACCTG
TCCCGTATGA GCGATACTGA ACAGAAGATT GGTACGTTGA TCCCGTTGAT TAAAGGGGGG
AATGATGTCC ACTGA
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| Protein sequence | MIDVLPGLTA LALAMMRPYG ILLILPLFTA RSLGSSLLRN GLIVAIALPV TPLFLSAPII
TNSSPVTWIG VLCTELLIGV VMGFVAALPF WAMNMAGFLI DTLRGATMST LFNPGMGVES
SLFGVLFTQI LTVLFLISGG FNQVLAALYG SYDSLPIGQG IQPAADLLLF LQTEWQMMFE
LCLCFALPAL LVMVLADLSL GLINRSARQL NVFFLAMPIK SALALFLLLI SLPYGLHHYL
SRMSDTEQKI GTLIPLIKGG NDVH
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