Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3895 |
Symbol | |
ID | 6090053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4296068 |
End bp | 4297354 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641598987 |
Product | putative transmembrane transport protein |
Protein accession | YP_001722613 |
Protein GI | 170026108 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGAAA TCTCGTCTTC AAAATCTGAA TTAAAAAAGC TCTATAAATC GGTTCCCTTT ACACAGTATG ATGTCGGTTG GGTCATATTA TGTATCGGGA TGGCTATCGG ATCAGGTATC GTATTTATGC CTGTACAGGT TGGTATTAAG GGGATTTGGG TCTTTATTGC TGCGGTTATT ATTTCGTATC CTGCAATTTA TTTACTGCAG AATCTCTATC TGCGTACACT TTCTGAATCT GATAACTGTA CTGATTATAC CAGTGTCATT ACGCAATATT TAGGTAAGAA CTGGGGGGTA GGTCTCGGTA TTGCTTATTT TTTAATGTTA TTGCACGGGA TGTTTTCTTA TTCCCTGGCC GTCACCTTTG ATAGTGCCTC TTACATCAAA ACATTTGGAT TAACTGAAGG CTTATTATCA GATTCAATAT GGTACGGGTT AATTATCTTG ACAGTTTTGG TTGCCATTGC TGCACAAGGT GAAAAAATTC TATTTAAAGT TTCGGGACCC ATGGTTTGTG TGAAGTTTGG CATCATTGTG GTGTTGGGTG TTGTAATGGT TCCTTATTGG GATTTTAACA ATATCTCCGC TTTTCCTGAA CTCTTCTCCT TTTTACGCGA TGTCCTGTTA ACACTACCGT TCACATTATT CTCTATCTTA TTTGTTCAAA TTCTTAGCCC AATGAATATT GCTTATCGTA AAGTGGAAAG CGATAAAAGA ATTGCCACCT ACCGGGCCAT CAGAGCAAAC CGTGTTGCTT ATATCATTTT GGCTGTTGCA GTGCTGTTCT TTGCCTTCTC TTTTACTTTC TCGATTAGCC ATGAGCAGGC TGTCTCGGCG TTTGAACAAA ATATCTCTGC CCTGGCGATT GCCGCTCAGG TTATTCCCGG TTCGATTGTC CGTATCATGA CTGCATTATT AAATATTTTT GCTATCTTGA CGGCGTTCTT GGGGATCTAT TTAGGATTTC AGGAGGCGAT TAAAGGTATT GTCGTTAATA TTATCAGTCG CTTTATCCCT GAAGAGAATA TTAATCAGAA AGTGCTACAC ATCGGGGTCT GTGTCGGTGT GATATTAACG TTATGGCTAT GGGTCTCAAC CCGGTTCTCT ATTCTTTTCT TCTTACAACT TGGCGGCCCG TTATTCGGGG TGGTCTCTTG TTTAATTCCT TGCTACCTGG TTTATAAAGT TCCTGTTTTA CATAAATTAA AAGGGCCAAC TATTTGGTTT ATCAGCTTTT TCGGTATTCT TCTTTGTCTT TCCCCATTCT TTAAATTCTT TGAGTAA
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Protein sequence | MSEISSSKSE LKKLYKSVPF TQYDVGWVIL CIGMAIGSGI VFMPVQVGIK GIWVFIAAVI ISYPAIYLLQ NLYLRTLSES DNCTDYTSVI TQYLGKNWGV GLGIAYFLML LHGMFSYSLA VTFDSASYIK TFGLTEGLLS DSIWYGLIIL TVLVAIAAQG EKILFKVSGP MVCVKFGIIV VLGVVMVPYW DFNNISAFPE LFSFLRDVLL TLPFTLFSIL FVQILSPMNI AYRKVESDKR IATYRAIRAN RVAYIILAVA VLFFAFSFTF SISHEQAVSA FEQNISALAI AAQVIPGSIV RIMTALLNIF AILTAFLGIY LGFQEAIKGI VVNIISRFIP EENINQKVLH IGVCVGVILT LWLWVSTRFS ILFFLQLGGP LFGVVSCLIP CYLVYKVPVL HKLKGPTIWF ISFFGILLCL SPFFKFFE
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