Gene YPK_3881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3881 
Symbol 
ID6088003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp4281540 
End bp4282619 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content52% 
IMG OID641598973 
Producthypothetical protein 
Protein accessionYP_001722599 
Protein GI170026094 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGACA TTACGCCTTT TTCTGGCTCC TATTTGCCAG ATGACATTCA ATTTCTGCTC 
AAACCAATAC AAATTGAAAT GACACCAGTC GAGGTTAAAG AGAAACTGAT CCAGTCAGGG
GCCCGCCATT ATTCTGACAT GCTCAGTCAG GAGCCAGCGC CGACCGAGCA TCACCTCACC
TTGTTTGCAC GAGCACTCGA TCAAGGGGCC ACACGCATGG CGCGTGAAGT GGTGATGCTG
GCGAAAGCCC TAATCAACCG TTTCGGTGAT ACCCCAATCG TGCTCGCCAG CTTGGTACGC
GCGGGCGTAC CACTTGGTGT GATGCTCCAT CACACTCTCC GCGCATTGGG AAAAACCTCT
TTTCACTACG GTATCAGTAT CATCCGTGAC CGGGGGATTG ATGAGGTCGC CTTGTCATAT
ATTGAGCAAA AACACGGCAC CGAAGGGCTG GTTTTCGTCG ACGGTTGGAC AGGTAAAGGG
GCGATCACCG GTGAACTGAC GCGCTCCCTA CAGGGGCGTC CGGGCTACCC CGAGCTGCCT
CGTCTGGTGG TGTTGGCGGA TCCCTGTGGC TGTTCTTGGT TATCTGCAAC CGATGATGAT
TGGCTTATCC CCTTCGGTAT TATGGGCGCG CCAGTCTCGG GGCTGGTCTC CCGTTCCCTC
TGGTCGGAAA AAGGGCTACA CGGTTGTGTT CACTGTGAGC ATTTGCAGGA GTTTGAGTGC
AGCCAACTGT TGGTGAATAC CGTCGCTGAC TGTCGCCAAC AACTTGATCT GTCCCAGATA
CCCGCGGCGG AGTGGGATTA TCAGCAAAAT GCCGCCCTGC GGATCCAAAG CCATCAAGTG
GTGAAAAAGA TGGCGGAACA GTTTGAGATT AATAGCGTAA ATCGCATCAA ACCGGGAATT
GCTGAAGCGA CCCGAGCCGT TCTTCGCCGT GTACCTGACC ATGTTCTGGT TCGTCACATT
GACGATCCTG ACGTGTCATT GCTGGTCTAT TTAGCCAAAC AGAAGAAAAT CGCAATAAAA
GAAGTGGGGA ATGAACTGGG CCAATACCGT GCTATCACCA TAATTAAAAA GGTCATCTGA
 
Protein sequence
MHDITPFSGS YLPDDIQFLL KPIQIEMTPV EVKEKLIQSG ARHYSDMLSQ EPAPTEHHLT 
LFARALDQGA TRMAREVVML AKALINRFGD TPIVLASLVR AGVPLGVMLH HTLRALGKTS
FHYGISIIRD RGIDEVALSY IEQKHGTEGL VFVDGWTGKG AITGELTRSL QGRPGYPELP
RLVVLADPCG CSWLSATDDD WLIPFGIMGA PVSGLVSRSL WSEKGLHGCV HCEHLQEFEC
SQLLVNTVAD CRQQLDLSQI PAAEWDYQQN AALRIQSHQV VKKMAEQFEI NSVNRIKPGI
AEATRAVLRR VPDHVLVRHI DDPDVSLLVY LAKQKKIAIK EVGNELGQYR AITIIKKVI