| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3869 |
|---|
| Symbol | |
|---|
| ID | 6089261 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 4268737 |
|---|
| End bp | 4269480 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641598961 |
|---|
| Product | putative periplasmic chaperone protein |
|---|
| Protein accession | YP_001722587 |
|---|
| Protein GI | 170026082 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAATT TCCCCACTCA CCATCGTGAT ATTGGTGCGA CAATCATATA CGTGAATAGC
GTCAATCGTT TTAACATCTT CTTTGTATTT ACGTTGTTGA TTTTATTGAG TAGTTGGAGC
GCAGTATCTT ACGCGTCGTT TAAATTAGAA AGCACGACGG TAATCTTGCA AGAAAGTGAG
GCTCGAACCA GTTTTACTAT CGATAATATC TCTAGCAATC CAATACTGCT GGTGACTAAA
TTAACGGATT TGGACGGCAA AAGTTTCAGT AAGCAGATTT TGATTTCCCC CCCGGTGACC
CGTATTAATG CAGGGCAAAG CCAGCAAGTG AATTTTGTCT TGAAGAAGGG GAGCGTCTTG
AACAATGAAG TGTTGTTAAA AGCCTCTTTT GAAGGGGTTG AACAGGTCCC CGGTAATGCG
GCGGTTATGC CAATTCGTCA GGAGATCGGC TTTCTGATCC AGCCGAGTGC TGTGCCACAA
ATTAGAATGC CGTGGCAAAC GTTAGTTTTC TCCATATCGG GCAATAATTT GGTTATTAAG
AATCCTGGTA AACATGTGGT CCGCTTAGGG CCTCAGATTA TTTTAGTCCC AAGTAATGAG
GTGGTTGCAC TGGGTAATCC TTATATTATG CCGGAGACTT CCAAACTGTT TCCGATAACG
TCATCACCCA CTGCCGTTAA AGTCACCCCG CTAAGCCGTT ATGGTTTTGT CCAGACTGAA
GTCACATTGC CGGTAACGCG TTAA
|
|---|
| Protein sequence | MQNFPTHHRD IGATIIYVNS VNRFNIFFVF TLLILLSSWS AVSYASFKLE STTVILQESE
ARTSFTIDNI SSNPILLVTK LTDLDGKSFS KQILISPPVT RINAGQSQQV NFVLKKGSVL
NNEVLLKASF EGVEQVPGNA AVMPIRQEIG FLIQPSAVPQ IRMPWQTLVF SISGNNLVIK
NPGKHVVRLG PQIILVPSNE VVALGNPYIM PETSKLFPIT SSPTAVKVTP LSRYGFVQTE
VTLPVTR
|
|---|
| |