| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3809 |
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| Symbol | |
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| ID | 6090941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4196731 |
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| End bp | 4197783 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598901 |
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| Product | ribosome-associated GTPase |
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| Protein accession | YP_001722528 |
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| Protein GI | 170026023 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1162] Predicted GTPases |
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| TIGRFAM ID | [TIGR00157] ribosome small subunit-dependent GTPase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000110208 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCAAGA ATAAACTGTC GAAAGGTCAA CAACGCCGTG TACAGGCTAA TCATCAGCGT
AGGCTACGCA CTGATAGAAA ACCTGAGTTA GATGACTCTC AGCTTGGCGA TGCGCAAGAA
GGTATCGTAA TCAGTCGCTT CGGTCAGCAT GCCGATGTCG AGGCCGTTGA TGGCACTCAG
CACCGTTGTA ATATCCGTCG AACCATCAAA TCACTGGTGA CCGGTGATCG GGTGGTCTGG
CGTCCCGGTT TACAAGCGCA GGAAGGTGTG CGAGTTAAAG GTATCGTTGA AGCCGTTCAC
GAACGGACAT CCGTCCTGAC TCGCCCAGAT CTCTATGATG GTGTGAAACC TATCGCTGCC
AATATCGACC AGATCGTGAT CGTATCGGCG ATCTTACCCG AGCTTTCACT TAATATTATT
GATCGCTATT TGGTGGCGTG CGAAACACTG GAAGTCGAGC CGTTAATCGT CCTGAATAAG
ATTGACCTGT TGGATGCCGA TGGCCGTAAA TTCGTTGATG GCATGATGGA TATTTATCGT
CGTATTGGTT ACGACGTCTT GGAAGTCTCC AGCCAGACAC GTGAGGGGAT GGAAGCCTTT
GAGAATGCAC TGACTGGCCG TATCAGTATC TTTGCTGGCC AATCCGGGGT GGGCAAATCC
AGCCTATTGA ATGCCCTGTT GCCGCCAACA GATAACGAAA TTTTGGTCAA TACGGTTTCT
GGTAACTCGG GCCTCGGCCA GCACACCACA ACCGCCGCAC GTCTGTACCA TTTCCAACAT
GGCGGTGATG TGATTGATTC ACCGGGCGTG CGTGAATTTG GTCTGTGGCA TTTAGCTCCG
GAACAAATTA CTCAAGGGTT TGTCGAATTC CGTGATTATC TCGGCCATTG CAAATTCCGT
GATTGCAGCC ATACCAACGA TCCCGGCTGT GCATTACGCG AAGCCGTAGA GCAAGGTAAA
ATTGCTGAGG AACGTTTCGA TAATTACCAT CGAATCCTAG AAAGTATGGA GCAAGCGAAG
CCGCGTAAAA CGTCAGACAG TGACGAGAAG TGA
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| Protein sequence | MSKNKLSKGQ QRRVQANHQR RLRTDRKPEL DDSQLGDAQE GIVISRFGQH ADVEAVDGTQ
HRCNIRRTIK SLVTGDRVVW RPGLQAQEGV RVKGIVEAVH ERTSVLTRPD LYDGVKPIAA
NIDQIVIVSA ILPELSLNII DRYLVACETL EVEPLIVLNK IDLLDADGRK FVDGMMDIYR
RIGYDVLEVS SQTREGMEAF ENALTGRISI FAGQSGVGKS SLLNALLPPT DNEILVNTVS
GNSGLGQHTT TAARLYHFQH GGDVIDSPGV REFGLWHLAP EQITQGFVEF RDYLGHCKFR
DCSHTNDPGC ALREAVEQGK IAEERFDNYH RILESMEQAK PRKTSDSDEK
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