| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3788 |
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| Symbol | |
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| ID | 6090066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 4174130 |
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| End bp | 4175773 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641598878 |
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| Product | isovaleryl CoA dehydrogenase |
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| Protein accession | YP_001722508 |
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| Protein GI | 170026003 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAAAG GTATGGATTG GCAGACTCAT TTGGTTTTCA ATCAGCCGGA GCCTTTGTCG
AACAGTAATT TGTTTCTGTC TGATTTGGCG TTGCGCGAAG CGGTAGTTCG GGAGCATGCG
GGTTGGGATG GAGAGAATCT CTCTTTGATC GGATTACAGC TTGGTTCGTT GGAATCACTT
GAATTGGGTC GGCTGGCAAA TGCCCATCCA CCAGAATTAT TACGTTATGA TGGTGCTGGG
CAGCGCTTGG GTCAGGTGCG GTTTCACCCT GCATGGCATG TCTTAATGCA AGGCTTGATC
CATCATCGGG TGCATAACCT CCCTTGGCAG GAAGATGCGC GGAACGGCTC CTTTGTGGCC
CGTGCTGCAC GTTTCATCCT ACATGCCCAG GTAGACGCGG GCGCGTTATG TCCGATAACC
ATGACGTTTG GTGCTATCCC ACTGCTACAA CAGACACTTC CTCCTCTCTT TCAAAACTGG
TTATCACCGC TGCTGTCTGA TCGTTATGAC CCCCATTTGT CCTTAGGCAA TCAGAAGCGG
GGTTTACTGA TTGGCATGGG AATGACAGAG AAACAGGGCG GTTCCGATGT CTTAAGTAAC
ACCACGCGGG CAGAGCCATT AAGCATTCGT GGGCAGGGTG AGGCCTACCG GTTGATCGGC
CACAAATGGT TTTTTTCAGT GCCACAGAGT GACGCGCATT TGGTACTGGC GCAGGCTGAG
GGCGGTTTAT CCTGCTTCTT TCTGCCCAAA ATACTCCCGG ATGGGACCCA CAACGCTATC
CGATTAGAGC GTTTGAAAGA GAAGCTCGGC AACTGCTCCA ACGCCAGTAG CGAAGTGGAG
TTTGATAATG CCACCGCCTG GCTATTGGGA GACGAAGGCG ACGGTATTCG ACAAATCCTG
AAGATGGGCG GTTATACCCG CTTTGATTGT GCTCTGGGGA GCCATGGGTT GATGAGGCGC
GCTTTCTCCG TCGCCTTGTA TCATGCCCTA CAGCGTCAGG TTTTTGGTAA GGCATTGGTA
GAGCAGCCCT TGATGCGACA AGTATTGAGC CGCATGGCAT TGCGTCTGGA AGGGCACACG
GCGTTACTGT TACGTTTAGC CCGTGCATGG GAGGCTTCTG GTGAGGTTCA TGAGCAAATT
TTTAGCCGAC TGCTGACACC CGCCGCTAAA TATCGGGTGT GTGGGCAGGG GAGCGCGTTT
GTGGCAGAAG CGATGGAAGT ACTCGGTGGG ATCGGTTATT GCGAACAGAG TGAGTTGCCA
CGGCTCTATC GTGAGATGCC GGTGAACAGC ATCTGGGAAG GCTCAGGCAA TATTATGTGT
CTTGATGTTT TGCGAACATT ACGCAAATTG CCAACTGCGG TCGAGATGCT CCAGCAAGAG
TTTTACCCGG TACGCGGGCA GAATCGGCTG TTTGACCGTG CCTGGCGGCA ACTGCAACAA
CGGCTGAAGA ATCCTAAAGA AGAGCAAGGG CGGGCGCTGA CTCAGCAACT TTTTGACCTG
TGTTGCGCTT CTCAACTACT GCGCTTTGCA TCGCCACGGT TAGCTGACGC CTGGTGCCGA
ATGACCTTGG ATCATCGTGA CCAATATATG TTGCCAGAGG CGGTTTGTGC GCGGTTACTG
GAACGTGCAA CGGGCGCACA TTAA
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| Protein sequence | MGKGMDWQTH LVFNQPEPLS NSNLFLSDLA LREAVVREHA GWDGENLSLI GLQLGSLESL
ELGRLANAHP PELLRYDGAG QRLGQVRFHP AWHVLMQGLI HHRVHNLPWQ EDARNGSFVA
RAARFILHAQ VDAGALCPIT MTFGAIPLLQ QTLPPLFQNW LSPLLSDRYD PHLSLGNQKR
GLLIGMGMTE KQGGSDVLSN TTRAEPLSIR GQGEAYRLIG HKWFFSVPQS DAHLVLAQAE
GGLSCFFLPK ILPDGTHNAI RLERLKEKLG NCSNASSEVE FDNATAWLLG DEGDGIRQIL
KMGGYTRFDC ALGSHGLMRR AFSVALYHAL QRQVFGKALV EQPLMRQVLS RMALRLEGHT
ALLLRLARAW EASGEVHEQI FSRLLTPAAK YRVCGQGSAF VAEAMEVLGG IGYCEQSELP
RLYREMPVNS IWEGSGNIMC LDVLRTLRKL PTAVEMLQQE FYPVRGQNRL FDRAWRQLQQ
RLKNPKEEQG RALTQQLFDL CCASQLLRFA SPRLADAWCR MTLDHRDQYM LPEAVCARLL
ERATGAH
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