| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3687 |
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| Symbol | |
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| ID | 6089890 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4074708 |
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| End bp | 4075757 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641598775 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001722407 |
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| Protein GI | 170025902 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTAG CATTAAATAC CACGCCGGGA ACCCCCTCCC GGCGTCATCT TTTGGTTTTT
TTACAGGGGC TATTCACCCT GGCCCTAACG CTATTCGGCC TGTTGGTGAT CACTTTCTTC
CTTTCGGCAC TGTCGCCAGT GGACCGAGTC CTGCAAATTG TGGGCGATCA CGCCAGTGAA
GCCACTTACC AACAGGTCAA ACAGCAACTC GGGTTGGACC AGCCATTATT TGTACAATTC
TGGCATTATC TGGTGCGATT GGCTCATGGA GATTTAGGGG TCGCCAGCGC CAGTGGCCAG
CCGGTATTAC AGGATCTACT GACCGTCTTC CCTGCCTCGT TAGAATTGGC AACCTTATCA
CTGCTCGTGG GCGGTGCACT GGGTATTTTC CTCGGTTTAT TGTGCGCCCG CTGGGCAGGT
AGCAAGCTGG ATATCACTAT CCGCTTTATC ACTCTGCTGG GTAATTCAGT GCCCATTTTC
TGGCTCGGCT TGCTGATGCT GCTGCTGTTT TATGCGCGGT TGCAATGGAG CCCCGGTCCG
GGTCGTCTGG ATGATATCTA CCAATATACT GTTGAAGCCA AGACCGGTTT TGTGCTGATC
GATACCTGGC GATCAGGTGA TATGGGGGCC TTTAATAATG CTCTCGGCCA CATGATTTTG
CCGGTCTCCC TACTGGCTTA CTATGCGTTA GCCAGTATCA CCCGCCTGAC CCGCTCGGCC
TGCCTAAGTG AATTGAATAA AGAGTACATC ACGCTGGCAA GGGCCAAGGG CGCAGGTGAA
ATGCGTATTT TACTGATGCA CGTCCTGCCC AATATTCGTG GCACCTTACT GACGGTCATT
GCGCTGGCCT ATACCAGTAT GTTGGAAGGT GCGGTGTTAA CCGAAACTGT TTTTGCCTGG
CCAGGCATTG GTCGCTACCT GACCAGCGCC CTATTTGCCG GGGACACCAC GGCGATTATG
GGCGGAACCT TGCTGCTCGG TATGTGCTTT ATTTTGATTA ACAATGTGAC GGATCTGCTC
GTCCGCCTGC TAGATCCGAG AACGCGCTGA
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| Protein sequence | MSVALNTTPG TPSRRHLLVF LQGLFTLALT LFGLLVITFF LSALSPVDRV LQIVGDHASE
ATYQQVKQQL GLDQPLFVQF WHYLVRLAHG DLGVASASGQ PVLQDLLTVF PASLELATLS
LLVGGALGIF LGLLCARWAG SKLDITIRFI TLLGNSVPIF WLGLLMLLLF YARLQWSPGP
GRLDDIYQYT VEAKTGFVLI DTWRSGDMGA FNNALGHMIL PVSLLAYYAL ASITRLTRSA
CLSELNKEYI TLARAKGAGE MRILLMHVLP NIRGTLLTVI ALAYTSMLEG AVLTETVFAW
PGIGRYLTSA LFAGDTTAIM GGTLLLGMCF ILINNVTDLL VRLLDPRTR
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