| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3638 |
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| Symbol | |
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| ID | 6090690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4014632 |
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| End bp | 4015768 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641598725 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001722358 |
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| Protein GI | 170025853 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.882001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCC ACTCCTACGA TCAGCTTTTG AAAAGCAAGC ATCGACTCTC TTTACTGCTT
TTCCTATTTC TTAATGCATC ATCAGCTATT TTCAGTATGC TATCATCGTC GCCCAAGACA
CCCGCGGTAA CGTTCCCTGT GGTGATGATT GCGGTTATAA GCTTGAGCGC GGCGGCTTAT
CTAATTTTTA TTTCAAAGAA CGACGCGGGC AGAAATAACT ATGTTGATAA AAGTAACCAT
GTTGATAAAA ATAACTATGC GAATAAATTG AATTTATTTT CAATCCTCAT CGGTCTACTT
TGGGCATGGC AAATCATTCT TAAATATGAA TATCTAGAGA CTAACGAAGA TAATTACTTA
TTACTCAGTC TGTTTACGAT CTTTTTTATC AGTACCATTG CTTTGTCTGA TAATTTTCTC
GCGTTTTGCC TGCATACGGC ACCTTCGGCA ATAACCGTCA TCTTACTGGA TGATTTTCAT
AATATTTTCC GCATTATATT TACCATCATG TTACCGCTGA TTGGTTTTTC TTTGCATCAC
TTGATGTTGC GTCGCACTGA TAATTTCACC CGTAAGCTGG TTGATCACCT TTCCAACGAA
AGAGAAAAAT TCAGTGATTT AAGCATGATA GACCCTCTGA CCAGTTTGTA TAATCGCCGT
GGGCTGGAGA GCAAGCTTGA AACGTTGTTA TCTCAGTCGC CGGGAAATCA TTATGTCCTG
CTGCTCGATA TCGATCACTT TAAAGCCTAT AACGACAACT ATGGCCACAC CATGGGCGAT
CAGGCTCTGG TACGGATTTC GGCGGCTATT CGCGATGCTG TGCGTTCAAG AGATATCGTG
GTGCGTTATG GTGGTGAAGA GTTTCTCGTA CTCCTAACAC ATGTCAGTGA AGAGTACGCC
AGCCAATTGG CAGAGCGTGT ACGTCAGCGC GTTTTAGGCC TGGATATTCC ACATGTCTTT
AATCATAAGG TCTCTACGAC GGTCACCTTA AGTGCGGGTA TTTCCCCCCT GCAAGCCTAT
GACTTGGCCG CGTCATTGAA AGCCGCGGAT GAAGCGCTTT ACCGGGCCAA GAGAAATGGC
CGCAATAACA TCGAATTTGC TAAAGATGAA TTATCAAATG TACAGTCTTC CCCTTGA
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| Protein sequence | MNSHSYDQLL KSKHRLSLLL FLFLNASSAI FSMLSSSPKT PAVTFPVVMI AVISLSAAAY
LIFISKNDAG RNNYVDKSNH VDKNNYANKL NLFSILIGLL WAWQIILKYE YLETNEDNYL
LLSLFTIFFI STIALSDNFL AFCLHTAPSA ITVILLDDFH NIFRIIFTIM LPLIGFSLHH
LMLRRTDNFT RKLVDHLSNE REKFSDLSMI DPLTSLYNRR GLESKLETLL SQSPGNHYVL
LLDIDHFKAY NDNYGHTMGD QALVRISAAI RDAVRSRDIV VRYGGEEFLV LLTHVSEEYA
SQLAERVRQR VLGLDIPHVF NHKVSTTVTL SAGISPLQAY DLAASLKAAD EALYRAKRNG
RNNIEFAKDE LSNVQSSP
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