Gene YPK_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3483 
Symbol 
ID6089666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3825543 
End bp3826337 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content46% 
IMG OID641598567 
ProductS-adenosylmethionine decarboxylase 
Protein accessionYP_001722203 
Protein GI170025698 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1586] S-adenosylmethionine decarboxylase 
TIGRFAM ID[TIGR03331] S-adenosylmethionine decarboxylase proenzyme, Escherichia coli form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000055229 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTCCAAGC TTAAACTGCA CGGCTTCAAC AACCTGACCA AAAGCCTGAG TTTTTGTATT 
TACGATATTT GTTATGCCAA GACCGCAGAC GACCGCGATG GCTATATCGC CTACATTGAC
GAACAGTACA ATGCCAATCG CTTGACCGAG ATCTTGAGCG AAACCTGCTC GATCATCGGT
GCCAATATTT TAAATATTGC TCGTCAGGAT TACGATCCAC AAGGTGCCAG CGTCACCATT
TTGGTCAGTG AAGAGCCCGT TGATCCACGC GATGTTGATA CCTCCGAACA TCCCGGCCCA
TTGCCAAGCG CCGTGGTGGC CCACCTGGAT AAGAGCCATA TCTGTGTGCA TACTTATCCA
GAAAGCCACC CTGAAGCGGG GTTATGTACT TTCCGTGCCG ATATCGAGGT CTCTACCTGT
GGGGTGATTT CTCCGCTGAA GGCCCTGAAT TACCTGATCC ATCAGCTCGA ATCCGATATC
GTGACCATGG ATTACCGGGT ACGGGGTTTC ACCCGAGATA TCAATGGGGT AAAACATTTT
ATCGATCACA AAATCAATTC CATTCAGAAT TTTATGTCCG ATGACATGAA GTCGCTTTAT
CACATGATGG ATGTGAATGT TTATCAGGAA AATATCTTCC ATACCAAGAT GATGCTGAAA
GATTTCGATT TAAAGCATTA TCTGTTTAAC GCCAAGCCGG AAGAGCTAAG CGCAGAAGAA
AAGGAACAGA TTACCCGCCT GTTATACAAA GAAATGCAGG AAATCTACTA TGGCCGCAAT
GTGCCGGAAG TGTGA
 
Protein sequence
MSKLKLHGFN NLTKSLSFCI YDICYAKTAD DRDGYIAYID EQYNANRLTE ILSETCSIIG 
ANILNIARQD YDPQGASVTI LVSEEPVDPR DVDTSEHPGP LPSAVVAHLD KSHICVHTYP
ESHPEAGLCT FRADIEVSTC GVISPLKALN YLIHQLESDI VTMDYRVRGF TRDINGVKHF
IDHKINSIQN FMSDDMKSLY HMMDVNVYQE NIFHTKMMLK DFDLKHYLFN AKPEELSAEE
KEQITRLLYK EMQEIYYGRN VPEV