| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3475 |
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| Symbol | |
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| ID | 6089434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3817006 |
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| End bp | 3818319 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641598559 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001722195 |
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| Protein GI | 170025690 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGCATA AAAACAGAAT AGCTATTGGG ATGCTACTCA GCATTGTCAT GTGGGTAATA
ATGATACCGA CAACCCAGGC TGACCTCTTG CCAAATGTGG AGGTCACACC ACCAAAATAT
ATGATGACCG AACGCGATAG CGAAGTTTAT TCGTTGGTTG GTGAACATGT TATTCCCGTC
GGAGAAATCA AAGAAGGCCA GTTGATTCAG GTGACGCCAG TTATTGCTGA ATACTATGAG
TTTAAGTTTG GCAACGGTAC CGGTTTTATT GATAAAGATG ATTTACGTGA GATTAATAAA
GCACAAAAAA ACAACGACAT GTTGGGCGAT TTAAATAAGC CCTTACCGAA TCAAAATATA
CTGACGATGC GTGAGGCTAA GGTTTATTTG GCTGCGGATG TGCGCAGTGA ACAATTTGCT
GTTCTGGCCG AGAACTTACG TTATCCCCTT GTTGGAAAAC TGAAAGATCG TTTAAGCAAT
ACTTGGTATC AGGTCAATAT TGGTGATCGC TTGGGGTATG TCAGCAGCGC AGACGCTGAA
ATAGACAACG GTATTCCGAT CCTGACTTAC CATCACATGT TGAAGAACGA AGAAAATAAA
CGCTTCCTGA ACACCTCAAC CACCACATCT GATGTGGCGT TCAGTAATCA AATGGCTTAC
CTCAAACAGG CGGGCTATGA CACTATTTCT CTGTATCAGC TCGAAGGCTA TCTGAATAAC
AAGATTAATC TGCCTGCGAA AGTTGTAGTG CTGACATTTG ATGATGGTTT GAAGTCAGTG
AGTCGCTATG CTTATCCTAT TCTGAAAGAG AATGGTTTCC GCGCCACGGC GTTTATTATC
TCTTCGCGTA TTAAACGGCA TCCACAAAAA TGGAATCCAG ATTCATTACA GTTTATGAGT
ATTGCTGAAC TGAAAGGAAT TCAAGATGTG TTTGATATAC AGTCTCATAC GCATTTTTTA
CACCGCACCG ATAATAGACA CCATCCCATA TTATTGAGTC GCTCTTATCA CAATATCATT
TTTGATTTTG AACGCTCACG TCGGGCATTA GCGCAGTTCA ATCCGCATGT GATTTTTCTG
TCATATCCCT TCGGGGGTTT TAATCAAACA GCGGTCAATG CGGCGAAGAA TGCCGGTTTT
CATTTGGCGG TGACCACGAT GCAAGGCAAG GTCAAGCCAG GCGATAATCC ATATACCCTG
AAACGGCTCT ATATTCTCCG TACTGACTCA ATACCGACCA TGGCGGAGCG CATAGCCAAT
CAACCCGGCT CGGTTGCGGT AAAACCGGCA CCCGCAGTGA TTGAAATGGA TTAA
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| Protein sequence | MWHKNRIAIG MLLSIVMWVI MIPTTQADLL PNVEVTPPKY MMTERDSEVY SLVGEHVIPV
GEIKEGQLIQ VTPVIAEYYE FKFGNGTGFI DKDDLREINK AQKNNDMLGD LNKPLPNQNI
LTMREAKVYL AADVRSEQFA VLAENLRYPL VGKLKDRLSN TWYQVNIGDR LGYVSSADAE
IDNGIPILTY HHMLKNEENK RFLNTSTTTS DVAFSNQMAY LKQAGYDTIS LYQLEGYLNN
KINLPAKVVV LTFDDGLKSV SRYAYPILKE NGFRATAFII SSRIKRHPQK WNPDSLQFMS
IAELKGIQDV FDIQSHTHFL HRTDNRHHPI LLSRSYHNII FDFERSRRAL AQFNPHVIFL
SYPFGGFNQT AVNAAKNAGF HLAVTTMQGK VKPGDNPYTL KRLYILRTDS IPTMAERIAN
QPGSVAVKPA PAVIEMD
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