Gene YPK_3474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3474 
Symbol 
ID6090137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3816477 
End bp3816857 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content48% 
IMG OID641598558 
Productaspartate alpha-decarboxylase 
Protein accessionYP_001722194 
Protein GI170025689 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0853] Aspartate 1-decarboxylase 
TIGRFAM ID[TIGR00223] L-aspartate-alpha-decarboxylase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACGCA CTATGTTGCA AGGCAAACTG CACCGGGTCA AAGTCACTCA AGCGGATTTG 
CACTATGAAG GCTCCTGCGC CATCGATCAG GATTTTCTGG AAGCCGCCGG TATTCTGGAA
TACGAAGCTA TTGATATTTA TAACGTTGAT AACGGTCAGC GTTTTTCAAC CTATGCGATT
GCTGCTGAGC GTGGTTCGCG GATTATCTCC GTGAATGGTG CCGCAGCACG CTGCGCTTGT
GTCGGTGATA AGCTCATTAT CTGTTCTTAT GTACAGATGT CAGATGCTGC TGCCCGTTTG
CACCACCCTA AAGTGGCTTA TTTTGAAGGT GAAAATCAGC TACAACGCAA AGCTAAGGCA
GTGCCGGTTC AGGTCGCTTA A
 
Protein sequence
MIRTMLQGKL HRVKVTQADL HYEGSCAIDQ DFLEAAGILE YEAIDIYNVD NGQRFSTYAI 
AAERGSRIIS VNGAAARCAC VGDKLIICSY VQMSDAAARL HHPKVAYFEG ENQLQRKAKA
VPVQVA