Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3400 |
Symbol | |
ID | 6090693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3731306 |
End bp | 3732295 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641598484 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001722120 |
Protein GI | 170025615 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTAATT TCGGCAGACT CAAACCGCAA TCCGTCGAAG GGTGGCTGGC TTGGGTCATC GTTCTTATGT TGGCCCTGTT CTCTCTGCTC AGCCGCGAGT TTCTCTCAAT ACAAAACGTG CTGGACCTGG CCGAAAGCTA CGCGGTGACC GGTATTTTTG CCCTCGGCCT GTTTGTGGTG CTGGTCACCG GGGGGATTGA TATCTCCTTT GCAGCCGTGG CCTCCGTGGT GCAATACGTG GTCGCCTCCT TGTTGCTTAA TGATGTGATT GCCAGCCCGG TGCTCTGTCT GGTCATTGCG GTAGCTATCG GCGTGTTGCT CGGGTTCGTT AATGCCGTGC TGATTTACTA CCTGAATATT GTTTCGATCA TTATCACCAT CAGTATGCAG TCCTTGCTGT TCGGTATGCT GATGTGGCTG ACCAACGGCC ACAGTATTTA TGACTTACCC AACTGGTGGG TCGATCAGCG CTCTATTTTG CCCTTCACCG TTAACGGCGA GAGTTACCAG ATTGGCTTGC CGCTGGTCAT CATGTTAGCC ATCGCGCTGT TGACCTGGAT TTTGCTGAAT AAAACGCATA TTGGCCGTCA GCTCTATGCC GTGGGAGGCA GCCCAGAATC CGCTCGCCGT ATCGGGATCC GTGTCTCTCT GATTTATCTG TTTGCCTATG GCTATTTGGG GGCCGCGGCA GCCATCGGCG GCATGTTACA GACCTACCGC ATGAGCGAAG TGGTACCTAG CGCGCTGGTC GGTGGTGAGT TGGATGTGCT GGCCGCAGCA GTATTAGGGG GAGCCAGCTT ATCCGGCGGG CGAGGGTCCG TGATTGGTAC GCTGATGGGG GTGTTCCTGA TTGGCATCCT GAAAAATGGC CTCAACCTGA TCGGTGTCTC CAGCTACTTC GTCAACATCG TGATTGGCAT GGTGATCGTC GCCGCCATTT GCGTAACCCA CTACAAAAAA CGCAAAGAAA CTGATGTTGG CTTTGTCTGA
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Protein sequence | MANFGRLKPQ SVEGWLAWVI VLMLALFSLL SREFLSIQNV LDLAESYAVT GIFALGLFVV LVTGGIDISF AAVASVVQYV VASLLLNDVI ASPVLCLVIA VAIGVLLGFV NAVLIYYLNI VSIIITISMQ SLLFGMLMWL TNGHSIYDLP NWWVDQRSIL PFTVNGESYQ IGLPLVIMLA IALLTWILLN KTHIGRQLYA VGGSPESARR IGIRVSLIYL FAYGYLGAAA AIGGMLQTYR MSEVVPSALV GGELDVLAAA VLGGASLSGG RGSVIGTLMG VFLIGILKNG LNLIGVSSYF VNIVIGMVIV AAICVTHYKK RKETDVGFV
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