| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3358 |
|---|
| Symbol | |
|---|
| ID | 6091177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 3684135 |
|---|
| End bp | 3684851 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641598437 |
|---|
| Product | putative two-component response-regulatory protein YehT |
|---|
| Protein accession | YP_001722078 |
|---|
| Protein GI | 170025573 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGAG TCATCATCGT CGACGATGAA CAACCTGCGC GTGAAGATTT ACGCGAAAGA
CTGAATGAAG AACACGGTAT CGAGATCGTC GCCGAATGCA GCAATGCTCT GGAAGCAATT
CCTGCTATCC AGCGCCTACA GCCTGATGTG GTATTTCTCG ACATCCAGAT GCCCAGAATC
AATGGGTTAG AATTGGCCTC AATGCTGAAC CCTGAAAGCA TGCCACATAT CGTATTTGTC
ACCGCTTACG ATGAATATGC CATTCGCGCT TTTGAAGAAC ATGCTTTTGA CTATCTGTTA
AAACCACTCG ACCATCAACG TTTGGCGAAG ACACTGACAC GTCTAAGTCG CGATTTAATC
GTAAAGAATA ATTTACACAA AGTTATCGAA CCAATACTTC GTCATATCCC CTGTTCAGGC
CACAACCGTA TTTTTTTGCT GAAAATTGAA GAAGTAGAAT ACCTAAGCTC CGAGCTTAGC
GGGGTGCATG TGGTGGGAAC CGTGCAATCA GGTTATACCC AGCTATCGTT AAAAACACTG
GAGGAAAAAA CTCCGTTTAT TCGGTGCCAC CGGCAATATA TGGTGAATAC CGAACAATTG
GGGGAAATTC AGCTTATGGA TAATGGTGCG GCTGAAGTCA TCACTCGTTC AGGAAAGCAT
ATCCCTGTTA GCCGCCGCTA TTTAAAGTCC CTGAAGGAGA AATTAGGCAT CGCATAA
|
|---|
| Protein sequence | MLRVIIVDDE QPAREDLRER LNEEHGIEIV AECSNALEAI PAIQRLQPDV VFLDIQMPRI
NGLELASMLN PESMPHIVFV TAYDEYAIRA FEEHAFDYLL KPLDHQRLAK TLTRLSRDLI
VKNNLHKVIE PILRHIPCSG HNRIFLLKIE EVEYLSSELS GVHVVGTVQS GYTQLSLKTL
EEKTPFIRCH RQYMVNTEQL GEIQLMDNGA AEVITRSGKH IPVSRRYLKS LKEKLGIA
|
|---|
| |