Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3349 |
Symbol | |
ID | 6088023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3674077 |
End bp | 3676650 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641598428 |
Product | protein disaggregation chaperone |
Protein accession | YP_001722069 |
Protein GI | 170025564 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000133942 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTGG ATCGTCTTAC CAGTAAATTC CAGCTTGCCC TCGCCGATGC CCAGTCTTTA GCTCTTGGGC GCGACAACCA GTTTATTGAA CCGTTACATT TGATGAGCGC ACTGCTTAAT CAGGATGGGG GGACGGTTCG CCCTTTATTG ACCTCGGCAG GGATTAATGT TGCACGTTTA CGTAGCGACA TTGAGCAAGC TTTAGGTCGT CTTCCTCAAG TTGAAGGCAC CGGCGGTGAT GTTCAACCAT CAAACGAGCT GGTTCGTGTA TTAAATCTTT GCGACAAATT AGCGCAGAAA CGTTCGGATA AGTTTATCTC TTCCGAGCTG TTCGTCCTGG CCGTACTTGA AGATCGTGGC ACGTTAACTG ACATGTTAAA GGCTGCAGGT GCAACCGTCG CTATAATAGA TAAGGCAATT GAAACCATGC GTGGTGGTGA CAAAGTCGAT GATCAGGGTG CTGAAGATCA GCGCCAGGCG TTGAAAAAAT TCACTATCGA CCTGACTGAG CGTGCCGAGC AAGGCAAACT CGATCCGGTT ATTGGCCGTG ATGAAGAAAT TCGCCGTACT ATTCAGGTAT TACAACGTCG AACCAAAAAT AACCCAGTGC TGATTGGTGA GCCTGGGGTG GGTAAAACCG CTATTGTGGA AGGTTTGGCG CAACGCATTG TGAACGGCGA AGTGCCAGAA GGCTTGAAGC ATAAGCGTGT ACTCTCATTA GATATGGGGT CGCTGATTGC CGGTGCCAAA TATCGTGGTG AATTTGAAGA GCGTTTGAAA GGCGTACTGA ACGACTTATC AAAACAAGAA GGCAGTGTGA TCTTGTTTAT TGATGAGTTG CATACCATGG TCGGTGCCGG TAAAGGCGAT GGGGCGATGG ATGCCGGTAA CATGCTGAAA CCTGCATTAG CGCGAGGTGA GTTACATTGT GTGGGGGCCA CTACCCTCGA TGAATACCGT CAATATATAG AGAAAGATGC TGCGCTCGAG CGGCGTTTCC AAAAAGTGTA TGTTGCGGAA CCAACGGTAG AAGACACTAT CGCTATTTTA CGTGGGCTGA AAGAGCGCTA CGAACTGCAC CATCACGTGC AGATCACTGA CCCAGCTATT GTGGCAGCCG CAACATTGTC ACACCGGTAT ATTTCTGATC GTCAGTTACC GGATAAAGCT ATCGACCTCA TTGATGAGGC AGGTTCCAGC ATCCGTATGC AAATGGATTC AAAACCCGAA TCATTGGATC GTCTGGAGCG CCGGATTATT CAGCTTAAAC TGGAACAGCA GGCCCTAAAA AAAGAGTCAG ATGACGCCAG TAAAAAACGG TTGGAAATGC TCAATACTGA GTTAGAGCAA AAAGAGCGTG AATATTCTGA ACTGGAAGAA GAGTGGAAAG CAGAAAAAGC TTCACTCACC GGGACTCAGA ATATCAAGAC GGAGTTGGAA CAAGCTAAAA TCACCTTAGA ACAAGCTCGT CGAGTAGGTG ATCTGGCTCG GATGTCAGAA CTTCAGTACG GTACAATCCC TGAGCTGGAA AAACAGCTGG CTGCGGCAAC CGCGCTAGAA GGGAAAACCA TGAAGTTGCT GCGTAACCGT GTCACAGAAA TCGAAGTTGC TGAAGTCCTG GCTCGCTGGA CCGGTATCCC GGTATCTCGC ATGTTGGAAA GTGAGCGGGA TAAGCTGCTA CGTATGGAAC AGGACTTGCA TCAACGAGTC ATTGGGCAAG ATGAAGCTGT TGAAGCCGTC TCCAACGCTA TCCGTCGGAG TCGCGCAGGG TTGTCTGATC CAAACCGACC AATTGGTTCG TTCTTATTCT TAGGGCCAAC GGGGGTTGGT AAAACTGAAT TGTGTAAAGC GTTGGCAACG TTCTTGTTCG ACAGTGACGA TGCCATGGTG CGAATCGACA TGTCCGAGTT TATGGAGAAA CATTCCGTAT CGCGGTTGGT CGGTGCACCT CCTGGCTATG TTGGGTATGA AGAAGGTGGC TATCTGACGG AAGCGGTTCG TCGTCGTCCT TATTCTGTGA TTTTGCTGGA TGAAGTTGAA AAAGCACATC CAGATGTTTT CAACATATTG TTACAGGTAT TGGATGATGG TCGTTTGACC GACGGGCAGG GGAGAACTGT CGACTTTCGT AACACGGTAG TCATTATGAC CTCTAACCTT GGTTCAGATT TGATTCAGGA ACATTTCGGC CAAATGAATT ACAGCGAAAT GAAGACAGTG GTTATGGATG TTGTTAGTCA CCACTTCCGT CCTGAATTTA TTAACCGTAT AGATGAGGTT GTTGTCTTCC ACCCACTTGG TCGGGCGCAC TTGGCTTCTA TTGCCAACAT TCAACTGGAG CGTTTGTATA AACGTCTGGA AGAACGTGGC TATGAAGTGA AGATTACTCA GCCTGCATTG GAATTCTTGG GTGAAGCTGG CTTCGACCCT GTTTATGGGG CGCGGCCATT AAAACGTGCA ATTCAGCAGG AAATTGAGAA CCCGCTGGCA CAGCAGATAC TTTCTGGCAA ACTAATACCG GGAATCCCCG TGACTTTAGA TGTTGAAAAT GGGCATATTA TTGCTAAGCA GTAA
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Protein sequence | MRLDRLTSKF QLALADAQSL ALGRDNQFIE PLHLMSALLN QDGGTVRPLL TSAGINVARL RSDIEQALGR LPQVEGTGGD VQPSNELVRV LNLCDKLAQK RSDKFISSEL FVLAVLEDRG TLTDMLKAAG ATVAIIDKAI ETMRGGDKVD DQGAEDQRQA LKKFTIDLTE RAEQGKLDPV IGRDEEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIVNGEVPE GLKHKRVLSL DMGSLIAGAK YRGEFEERLK GVLNDLSKQE GSVILFIDEL HTMVGAGKGD GAMDAGNMLK PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVYVAE PTVEDTIAIL RGLKERYELH HHVQITDPAI VAAATLSHRY ISDRQLPDKA IDLIDEAGSS IRMQMDSKPE SLDRLERRII QLKLEQQALK KESDDASKKR LEMLNTELEQ KEREYSELEE EWKAEKASLT GTQNIKTELE QAKITLEQAR RVGDLARMSE LQYGTIPELE KQLAAATALE GKTMKLLRNR VTEIEVAEVL ARWTGIPVSR MLESERDKLL RMEQDLHQRV IGQDEAVEAV SNAIRRSRAG LSDPNRPIGS FLFLGPTGVG KTELCKALAT FLFDSDDAMV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG YLTEAVRRRP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL GSDLIQEHFG QMNYSEMKTV VMDVVSHHFR PEFINRIDEV VVFHPLGRAH LASIANIQLE RLYKRLEERG YEVKITQPAL EFLGEAGFDP VYGARPLKRA IQQEIENPLA QQILSGKLIP GIPVTLDVEN GHIIAKQ
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