| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3305 |
|---|
| Symbol | |
|---|
| ID | 6089556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3617881 |
|---|
| End bp | 3619242 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641598382 |
|---|
| Product | Na(+)-translocating NADH-quinone reductase subunit A |
|---|
| Protein accession | YP_001722027 |
|---|
| Protein GI | 170025522 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1726] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrA |
|---|
| TIGRFAM ID | [TIGR01936] NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.478432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGT TTAAACCTAT GATTAAAATA AAGAAAGGGC TAGATCTTCC CATTGCTGGA
GCCCCCGTTC AGACGATACA AGATGGTCCA GCGATTCATC ATGTGGCCCT GCTCGGTGAA
GAGTATGTTG GTATGCGTCC TTCAATGTTG GTGCAAGAAG GCGATCAGGT TAAAAAAGGT
CAGGCGCTGT TTGAAGACAA AAAGAATCCG GGCGTGTTGT TTACCGCCCC TGCCAGCGGC
AAAATCAGTG CTATCAATCG TGGTGAGCGT CGAGTATTGC AATCGGTGGT GATTGAAGTT
GAAGGTGATG AGCAAATCCC TTTCGAGCAT TATGCTGCTG AGGAGCTTAA TCAACTGAGC
GATGAGCAGG TTCAACACCA TCTGTTGACG TCCGGTTTAT GGACTGCGCT GCGGACTCGC
CCATTCAGTA AAACACCGGT TCCAGGCAGC CGTCCGCGCG CTATCTTTAT CAGTGCGATG
GATACCCAAC CGTTGGCGGC AGATCCGCAG GTTATTATTG CCACTGAATC AGAGGCGTTT
AACCATGGCT TGACCGTATT GACGCGGCTG ACGGACGGTA AAGTACACGT CTGCCACGCG
GCAGGGCAGG CTGTGACTCG TCATACCAAT ACGCAAGTGA CTTACAACGA ATTCTCCGGG
CCGCACCCTG CGGGTCTGGT GGGGACACAT ATTCATTTTC TTGAGCCAGT CAGCCAGACC
AAAATGGTTT GGCATGTGGG CTATCAGGAT GTCATTGCTA TCGGTAAATT GTTTACCCGT
GGTGAGTTGT GTACTGACCG CATCGTCGCT TTGGCGGGTC CACAGGTGAA TCAACCCATT
TTATTGCGTA CTCGTTTAGG GGCCAGCTTA TCTGAACTGA CCGCCGGTAA ACTAAAAGAG
GGTGATAACC GCATTATTTC AGGTTCAGTC CTCAGCGGTA CCGCGTTCTC TGCTACCCAT
GGGTATCTGG GGCGTTTTCA TCAGCAAGTC TCCGTTATCA GCGAAGGGCG TGAAAAAGAG
TTATTTGGTT GGGTGATGCC GGGGCGCGAT AAATACTCCA TTACCCGCAC GACGCTGGGC
CACTTCTTCA AACGCAAATT GTTTGCTTTC TCGACTGATA TGCACGGTGG TGAGCGTGCC
ATGGTGCCAA TTGGCAACTA TGAGCGGGTC ATGCCACTGG ATATCCTGGC GACCCATCTG
CTACGTGATT TATTGGCCGG TGATACCGAC AGCGCACAAG CACTCGGTTG TTTGGAGTTG
GACGAAGAAG ATCTGGCTTT GTGTACTTTT GTTTGTCCCG GTAAGTACGA ATACGGTCCG
GTACTGCGCG ACATACTGAC CCAGATTGAG CAGGAAGGAT AA
|
|---|
| Protein sequence | MKSFKPMIKI KKGLDLPIAG APVQTIQDGP AIHHVALLGE EYVGMRPSML VQEGDQVKKG
QALFEDKKNP GVLFTAPASG KISAINRGER RVLQSVVIEV EGDEQIPFEH YAAEELNQLS
DEQVQHHLLT SGLWTALRTR PFSKTPVPGS RPRAIFISAM DTQPLAADPQ VIIATESEAF
NHGLTVLTRL TDGKVHVCHA AGQAVTRHTN TQVTYNEFSG PHPAGLVGTH IHFLEPVSQT
KMVWHVGYQD VIAIGKLFTR GELCTDRIVA LAGPQVNQPI LLRTRLGASL SELTAGKLKE
GDNRIISGSV LSGTAFSATH GYLGRFHQQV SVISEGREKE LFGWVMPGRD KYSITRTTLG
HFFKRKLFAF STDMHGGERA MVPIGNYERV MPLDILATHL LRDLLAGDTD SAQALGCLEL
DEEDLALCTF VCPGKYEYGP VLRDILTQIE QEG
|
|---|
| |