Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3185 |
Symbol | |
ID | 6087189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3482447 |
End bp | 3483706 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 641598262 |
Product | O-antigen biosynthesis protein Wxy |
Protein accession | YP_001721907 |
Protein GI | 170025402 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.718225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGAAATAA AAAGATCGAC GGCGGAAAAA AGCAGTATAA ACAAAACAAT CGTTGTGTTT ACATCCTTAT ACAGTATTGC ATTATGGATT AATTTTATAG TTATAATCAA TTCAGGTAAA TATAGTGCTG ATTTGCAAGG TATTGATGTG GGAATAAATA CTAATGAGTT ATTATATATT GCATTGGTGA ATCAGTTGTT TTTACTAATG GCGGTTTTTA TCTTCAATAT ATTGAATTCT AGGAATATAA AGATTGGTAA TTTGCGTTTT GAGTTTAACA AAGATAGGTT TTCTGTATTT TTCTTCATTA TATTGATACT TAATATGGTT TTTTTCTTTT CCACAGGAGT TGGCAAGGTA TATAGTACAA AAACACATTA TCTAAAAACA TTATTTATTA TACTTGAACC AGGGAATATA TTCTTCCTTT ATTATTTAAT AGTAAGGAAT ACTGGTAGTA AATTGTTTTT CGTTAATGTA GTTCTATATT CAATATTGCA AATATCCAAA GGCTGGACTT CTTTTATCCT TATAATTGGT GTATTTGAAT TGTATTTTTT TATTTTAAGA AATAATAAAA GTAAGTTATT TAGATTGCCA TTTATCTTTA GTGTTATTAT TCCGTTGCTA TTATTTACTG GAGGAAGTGT TGCATATAAG TATGCCTTTT TGGTAAAAAA TGAAATTAGA GGAAGTTCTG TTGAATCAGT TTCTTTAGAT TATATTGGTT CAACTGTTCT ACTTGCAAGC CGATTAAGCA ATTATAATGT TGCTGCCGGG TTTTATTCAA AATTAGATGA TGTTGTTAAT GTGGTTAGAG CCCAAGAAGA ATTTTCTGAG TTAAAGAGTT TTAGCCAGTA TTTTCTTCCT GTTAGACCGA ATGAAATAGA AGCTAGACCA TTAAGTAATT CATCTATGTT AGCATTTTAT CCAACATTTG GAGCAAAATA CTCAAATGTA GAGATTGGTA TGTTTACTTA TTACCAAATA CTTTCTAATG TTGATATATA TGAAGCAGTA TTCGTATTGT TTATTACATT TTTTATGCTG TTATTCTTTT TCTCATTTTA CAAATTGATT GCGAACAATG AAAATGTTGA GCTACTATTG TTTATAATGG TTTTTTATTT TTTATTCAGC ATGTGTTCAC CAACTTATTT TATAAGACCA TATGCTTTAG GAGTTTTATT TATACCGTTT TTCGTTGTTT TGGGTATATT AAAAATAAAA AGGAATTTAA ATTATTCTAA TGCTAAATAA
|
Protein sequence | MEIKRSTAEK SSINKTIVVF TSLYSIALWI NFIVIINSGK YSADLQGIDV GINTNELLYI ALVNQLFLLM AVFIFNILNS RNIKIGNLRF EFNKDRFSVF FFIILILNMV FFFSTGVGKV YSTKTHYLKT LFIILEPGNI FFLYYLIVRN TGSKLFFVNV VLYSILQISK GWTSFILIIG VFELYFFILR NNKSKLFRLP FIFSVIIPLL LFTGGSVAYK YAFLVKNEIR GSSVESVSLD YIGSTVLLAS RLSNYNVAAG FYSKLDDVVN VVRAQEEFSE LKSFSQYFLP VRPNEIEARP LSNSSMLAFY PTFGAKYSNV EIGMFTYYQI LSNVDIYEAV FVLFITFFML LFFFSFYKLI ANNENVELLL FIMVFYFLFS MCSPTYFIRP YALGVLFIPF FVVLGILKIK RNLNYSNAK
|
| |