Gene YPK_3185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3185 
Symbol 
ID6087189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3482447 
End bp3483706 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content27% 
IMG OID641598262 
ProductO-antigen biosynthesis protein Wxy 
Protein accessionYP_001721907 
Protein GI170025402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.718225 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAATAA AAAGATCGAC GGCGGAAAAA AGCAGTATAA ACAAAACAAT CGTTGTGTTT 
ACATCCTTAT ACAGTATTGC ATTATGGATT AATTTTATAG TTATAATCAA TTCAGGTAAA
TATAGTGCTG ATTTGCAAGG TATTGATGTG GGAATAAATA CTAATGAGTT ATTATATATT
GCATTGGTGA ATCAGTTGTT TTTACTAATG GCGGTTTTTA TCTTCAATAT ATTGAATTCT
AGGAATATAA AGATTGGTAA TTTGCGTTTT GAGTTTAACA AAGATAGGTT TTCTGTATTT
TTCTTCATTA TATTGATACT TAATATGGTT TTTTTCTTTT CCACAGGAGT TGGCAAGGTA
TATAGTACAA AAACACATTA TCTAAAAACA TTATTTATTA TACTTGAACC AGGGAATATA
TTCTTCCTTT ATTATTTAAT AGTAAGGAAT ACTGGTAGTA AATTGTTTTT CGTTAATGTA
GTTCTATATT CAATATTGCA AATATCCAAA GGCTGGACTT CTTTTATCCT TATAATTGGT
GTATTTGAAT TGTATTTTTT TATTTTAAGA AATAATAAAA GTAAGTTATT TAGATTGCCA
TTTATCTTTA GTGTTATTAT TCCGTTGCTA TTATTTACTG GAGGAAGTGT TGCATATAAG
TATGCCTTTT TGGTAAAAAA TGAAATTAGA GGAAGTTCTG TTGAATCAGT TTCTTTAGAT
TATATTGGTT CAACTGTTCT ACTTGCAAGC CGATTAAGCA ATTATAATGT TGCTGCCGGG
TTTTATTCAA AATTAGATGA TGTTGTTAAT GTGGTTAGAG CCCAAGAAGA ATTTTCTGAG
TTAAAGAGTT TTAGCCAGTA TTTTCTTCCT GTTAGACCGA ATGAAATAGA AGCTAGACCA
TTAAGTAATT CATCTATGTT AGCATTTTAT CCAACATTTG GAGCAAAATA CTCAAATGTA
GAGATTGGTA TGTTTACTTA TTACCAAATA CTTTCTAATG TTGATATATA TGAAGCAGTA
TTCGTATTGT TTATTACATT TTTTATGCTG TTATTCTTTT TCTCATTTTA CAAATTGATT
GCGAACAATG AAAATGTTGA GCTACTATTG TTTATAATGG TTTTTTATTT TTTATTCAGC
ATGTGTTCAC CAACTTATTT TATAAGACCA TATGCTTTAG GAGTTTTATT TATACCGTTT
TTCGTTGTTT TGGGTATATT AAAAATAAAA AGGAATTTAA ATTATTCTAA TGCTAAATAA
 
Protein sequence
MEIKRSTAEK SSINKTIVVF TSLYSIALWI NFIVIINSGK YSADLQGIDV GINTNELLYI 
ALVNQLFLLM AVFIFNILNS RNIKIGNLRF EFNKDRFSVF FFIILILNMV FFFSTGVGKV
YSTKTHYLKT LFIILEPGNI FFLYYLIVRN TGSKLFFVNV VLYSILQISK GWTSFILIIG
VFELYFFILR NNKSKLFRLP FIFSVIIPLL LFTGGSVAYK YAFLVKNEIR GSSVESVSLD
YIGSTVLLAS RLSNYNVAAG FYSKLDDVVN VVRAQEEFSE LKSFSQYFLP VRPNEIEARP
LSNSSMLAFY PTFGAKYSNV EIGMFTYYQI LSNVDIYEAV FVLFITFFML LFFFSFYKLI
ANNENVELLL FIMVFYFLFS MCSPTYFIRP YALGVLFIPF FVVLGILKIK RNLNYSNAK