Gene YPK_3118 details

Gene Information

• Locus tag: YPK_3118
• ID: 6087753
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 3414637
• End bp: 3415167
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 641598196
• Product: phage-related membrane protein
• Protein accession: YP_001721842
• Protein GI: 170025337

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTTA TAGTTATTGC AGCTATTCTT GGATTAATAC CCGCCTTTAT CGCACAAAGT 
AAAGGGCGAT CATTTGGATT GTGGTGGCTA TATGGGGCTT TAATTTTCAT CGTTGCATTA 
ATTCATTCTA TTTTCATTAG TGGAGATGCG CGGGATATTG AAAAGGTAAA ACTGAGTCAG 
GGTATGGTTA AATGCCCATT TTGTGCGGAG ATAATTAAGA ATGAAGCGAT TAAGTGCAAA 
CATTGCGGCA GTGATATTAA TTTAGCCATT GATTTAGATG CTTCAGTGAA AGAATTTAAT 
GTATCAGACT TACCTTGTGA ATTGTTTTTT ACACGGAGTA ATGCCACTTT TCATGTAAAT 
GATGACGCAA TTAAGGGCAT GGTTGATAAC ATAAAGAAAG CGAACCCAGG AATTCATCCC 
ATGAATTTAA TATCCCGACA TATTAGGGAT GTTGAGGCAT TACAAAGTAA ATTGCCTGGC 
AGCGTAAAGA ACGATTTTAT TTCACGCTAT AACTATTGGA TAAATAAATA A 

 

Protein sequence

MNFIVIAAIL GLIPAFIAQS KGRSFGLWWL YGALIFIVAL IHSIFISGDA RDIEKVKLSQ 
GMVKCPFCAE IIKNEAIKCK HCGSDINLAI DLDASVKEFN VSDLPCELFF TRSNATFHVN 
DDAIKGMVDN IKKANPGIHP MNLISRHIRD VEALQSKLPG SVKNDFISRY NYWINK