| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3117 |
|---|
| Symbol | |
|---|
| ID | 6090201 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 3413154 |
|---|
| End bp | 3414560 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641598195 |
|---|
| Product | DNA circulation family protein |
|---|
| Protein accession | YP_001721841 |
|---|
| Protein GI | 170025336 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4228] Mu-like prophage DNA circulation protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGA TCAGCAATGC ACTTTCTGAT TTATTAGGTA CCGGCGGCGA TAGCTGGCAG
TGGTCAGAGC ATCTTCACCC CGCCTCTTTC CGTGGGGTTC CCTTTGCGGT CATCAGTGCG
GAAGGTGTTT TCGGTCGCCG GCAGGCCATT CATGAATACC CTTATCGAGA TACCGCATGG
ATTGAGGATC TGGGCCGCGC CACTCGTCGC CTGACCATCC GCGGTTTCCT TATTCAGAGT
AGCGGTCTTT ATACCGCGCC GGATGTCATG ACTCAGCGTG ATTCACTGAT TGCTGCATGT
GAAATGCCTG ATGCGGGAAC ACTAGTACAC CCAACACTCG GTGAAATGAC GGTCAGCATC
CCAGAAAGTG GTCTCCGCTT GAATGAGGGG GCCGAGTCCG GGCGTGTTTT TGAATTTACG
CTGACCATTA TTGAGTCGGG TTTACGGGTA TTTTCTGTTA CCAGTTCAGC TGATGCGGTT
TCGTCTATTC AGTCATCATG GTTTGGCCTG GCCTCAAAGT CCGTCGCCAC CTTTATTGCC
ACGGTCAAAG GTGAGATCCG TTCTGTCACT CAGACCATAA GAACGCTAAA AAGTACCGCA
GCATTCTGGG TCAGCATGGT GAATTCAACC ACCAGTGAGG CGACAAATCT CGGGAATATC
CTCCGTTCAA CACTTGGGCG TGATCGTTAT GGCCGCTTTA ATCACGGCAC TGTAGGCGGC
AGCATATCAG GGGCCACAGC ATCAGTTAGC ACGCAGCGCG ATACAACGAA CCTGTCCGCG
CTGGTAGCCC AAAAAATGGC GGTATCGGTC GAGGGGCGGG AGTCAGTAAA TAGAGCTGCA
GAGACATTAC AAGCGGCCTC AGCAGTGGAG GCTCATGCAA ATGCTGTTCT TGCTGTAGTG
AATGCCATCT TGGTCAGCGG AGCTAGCACC CTTGATTTAA TCCGCATGAT GCAAGAGTTA
ACGGCAATCA CTGACGACAC CTTTCGACCC AATCCCGGTG ACAGCAATAC CGCCGCTGCC
AGTTATCAGC TCATTATTGT GCTGTGTGCG GGCGCGATGG TATTTGCCGC GTCGCAATAT
CAACCGGAAA GCTATGACGA TGCGGTCGAT ATATTGACGC GGGTCTGTGG TGTGGTAGAT
GGTGCCGCGC TTTCAGCGGC TGATACAGGC AATGATGAGG TGTATCAGTC ATTAATTATG
TTACGTGAGT CCATCGTCAC TCTGTTACAG CAGACGGGCG CTAACCTGTC TCGTGTGGAG
ATAGTCAATT TTAACCGCTC ACTGCCCGCG CTAAATCTGG CCAACCGGCT CTATCAGGAT
GCGCGACGGG GTGATGCGCT GGTGAAAATG GCGGTTCCCG TTCATCCGGC ATTTATGCCC
CTTCGATTTA AGGCGCTGAA CTCATGA
|
|---|
| Protein sequence | MSLISNALSD LLGTGGDSWQ WSEHLHPASF RGVPFAVISA EGVFGRRQAI HEYPYRDTAW
IEDLGRATRR LTIRGFLIQS SGLYTAPDVM TQRDSLIAAC EMPDAGTLVH PTLGEMTVSI
PESGLRLNEG AESGRVFEFT LTIIESGLRV FSVTSSADAV SSIQSSWFGL ASKSVATFIA
TVKGEIRSVT QTIRTLKSTA AFWVSMVNST TSEATNLGNI LRSTLGRDRY GRFNHGTVGG
SISGATASVS TQRDTTNLSA LVAQKMAVSV EGRESVNRAA ETLQAASAVE AHANAVLAVV
NAILVSGAST LDLIRMMQEL TAITDDTFRP NPGDSNTAAA SYQLIIVLCA GAMVFAASQY
QPESYDDAVD ILTRVCGVVD GAALSAADTG NDEVYQSLIM LRESIVTLLQ QTGANLSRVE
IVNFNRSLPA LNLANRLYQD ARRGDALVKM AVPVHPAFMP LRFKALNS
|
|---|
| |