Gene YPK_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3114 
Symbol 
ID6090445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3411060 
End bp3411497 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content52% 
IMG OID641598192 
ProductGP46 family protein 
Protein accessionYP_001721838 
Protein GI170025333 
COG category[S] Function unknown 
COG ID[COG4381] Mu-like prophage protein gp46 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCG ATATCAAAAC AATCTGGGAG CCGGGCAAAT TGCTGGGCGA CTGGCAGACC 
GGCGGCGGTG GGCTACTGGA TGGCAATGAT TTAGAGACTG CTATTTTGAT TAGCCTATTC
ACTGACCGGT TAGCTCGTGC TGATGATGTT ATTGATGGTG ATGATCGTCG CGGCTGGTGG
GGCGATACTG GATCAGAGCA CCCGATCGGC TCCCGCCTGT GGTTGCTGCG CCGCGAAAAA
CTCACCACCA AGGTAGCGCT AAAGGCTGAA GACTATGCCA ATGAAGCCTT GGTTTGGTTG
CTTGATGATC GCGTGGTGAC GGCAATCAGC ACCAATGCCC AGATAATGTA CCCCAACCGG
TTAAATCTCA TCATTGGCTA CCAGCAGCCC GCTAAAACAC AGGCTTCAGT CAAATTTTCA
TGGGTATGGG AGATCTAA
 
Protein sequence
MTTDIKTIWE PGKLLGDWQT GGGGLLDGND LETAILISLF TDRLARADDV IDGDDRRGWW 
GDTGSEHPIG SRLWLLRREK LTTKVALKAE DYANEALVWL LDDRVVTAIS TNAQIMYPNR
LNLIIGYQQP AKTQASVKFS WVWEI