Gene YPK_2813 details

Gene Information

• Locus tag: YPK_2813
• ID: 6087787
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 3100307
• End bp: 3100903
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641597882
• Product: phage baseplate assembly protein V
• Protein accession: YP_001721542
• Protein GI: 170025037
• COG category: [S] Function unknown
• COG ID: [COG4384] Mu-like prophage protein gp45
• TIGRFAM ID: [TIGR01644] phage baseplate assembly protein V

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGATG TCAGTGGGCA AATCTCAACT CTATACCGAC AGATAAAAAT GCTGCTGGGG 
ATCGGGCGGG TGACCGCTTT TGACGACAGC AACGGAGTGC AAACCGTGCA ATATCAAACC 
CCGTTGGAAG TCCACAGCGA TACGCCAAGG TTAGCTGAAT TTGGTTTCTC GTCGGGATTG 
CCGGCGGGCA GTGATGTGGT CATTGGTTTC CTGGGGGGTG ATCGTTCCAG CGGGATGATC 
ATCGCCTCAC ATCATCCGGC CTATCGGCAT ATGGGGCTCA ATGCAGGTGA AACGGTGATT 
TACGCCCAGT GGGGGCAATT TATCAAACTG ACCGAGAGTG GGGTGGTGAT TGAGGCTAAC 
AACCAGCCGG TGACCGTCAA TAATGCGACA GAGGTGACCG TAAATGCCAC GGTAAAAGTA 
CGGTTAAATA CGCCGTTGCT TGAGGTAAGC GGCAATATCA TTGATAACGC TGACAGTAAT 
AGCGCCACGC TAAAAAGCTT ACGTGACGCC TACAACAGCC ACAATCATCA ACTTAAAAAC 
GTCCAGTCGG GCAGTACGAC ACTTACCAGT GAAACGCCCG CTAAGGTGGT GCGATGA 

 

Protein sequence

MSDVSGQIST LYRQIKMLLG IGRVTAFDDS NGVQTVQYQT PLEVHSDTPR LAEFGFSSGL 
PAGSDVVIGF LGGDRSSGMI IASHHPAYRH MGLNAGETVI YAQWGQFIKL TESGVVIEAN 
NQPVTVNNAT EVTVNATVKV RLNTPLLEVS GNIIDNADSN SATLKSLRDA YNSHNHQLKN 
VQSGSTTLTS ETPAKVVR