Gene YPK_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2812 
Symbol 
ID6088963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3099855 
End bp3100310 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content53% 
IMG OID641597881 
ProductGP46 family protein 
Protein accessionYP_001721541 
Protein GI170025036 
COG category[S] Function unknown 
COG ID[COG4381] Mu-like prophage protein gp46 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACCG ATATTAAGAC CGTTTGGGAT GTAAATGCCT TGCTGGGGGA TTGGCAGACC 
GGTAACGGCG GCTTACTGGA GGGTGATGAC TTGCAGACGG CTATTCTGCT GAGTTTATTC
ACCGACCGTT TAGCGCGGGC AGATGATGCG ATTGATAGCC CTGATCGCCG TGGTTGGTGG
GGTGACAGTG GTGCAGCATC GGCGATTGGC TCGCGGCTCT GGCTACTGCG GCGTGAGAAA
CTCACCACAC AAGTGGCTAT CAAAGCGGAG GATTATGCCA CAGAGGCGCT GGCATGGCTG
ATCGAAGATA GTGTGGTGGC CGCGATTAAT GTCCGTGCGC ACATTATCGC CCCCAACACC
CTGGTGCTGG TGGTGAGTTA CCAACAACCC AGCCAAACAC GATCAGCTAA TCAAACACAG
TCATCAATTA AATTTTCATG GGTATGGGAG GAGTAA
 
Protein sequence
MTTDIKTVWD VNALLGDWQT GNGGLLEGDD LQTAILLSLF TDRLARADDA IDSPDRRGWW 
GDSGAASAIG SRLWLLRREK LTTQVAIKAE DYATEALAWL IEDSVVAAIN VRAHIIAPNT
LVLVVSYQQP SQTRSANQTQ SSIKFSWVWE E