| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2542 |
|---|
| Symbol | |
|---|
| ID | 6088942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2785927 |
|---|
| End bp | 2786967 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641597610 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_001721272 |
|---|
| Protein GI | 170024767 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4779] ABC-type enterobactin transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.805909 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCCCG TTGATTCAGT CAGAACGCTG ACGCTGGGAT CTTGGGTCTT TTTAGCGCCA
GCCCGCCGAA CCGGGGTTTA CCTGCTGCTG ATATGGCCCA TTTTATTGCT ATGCCTCACC
GCTGCGCTAA TGCTCAGCCC CAGTGGTTTC GAAGGGGGAA AAATGCTGGC GGTATTGGCT
GGCGAAGGTA GCCAGTACGA GGAGTTTATC TTACTGCAAT TGCGGTTACC AAGAGCATTG
GTTGCTCTGG GGGCCGGTGC CGCCCTGGCC ATTTCCGGCG CTATTTTCCA AACCACAACC
CACAACGCCT TGGCTAGCCC CGATATTATC GGTATCACCG CCGGCGCGTC CGCTGGCGTG
GTTGCCACCC TACTACTTTG GCCAGGGGTC ATGCCGGTAC CGTTGGGGGC ATTTATCGGT
GCCTGTACTG CAGTGGCTTT AGTCTATGCG GGCAGCATGA GCATCCTGTC TCATCCAGAG
AGAATTATTA TTTCCGGTAT CGCCGTTGGT GCCGTGTGCA TCGCATTTGT TAACTTTGCG
ACTTCACAAG TCCGTCTGGA ACAGGCGAGT CAGTTAGCCG CTTTGCTAAG CGGCAGTTTG
GCAGAGAAAA ACTGGCGGGA TGTCGGCATC ATCAGCCTGA CATTGGGGCT GGTTATGCCG
GGCTTGGTAT ATCTCAGCCG TCAACTCAAT TACCTGAGCC TTGGAGCTGC GGTTGCCCAG
CCGCTAGGTG TCAATATCCG CCAGACGCAT TGGCTAGGTC TATTGGTTGC CATCGCACTG
GCAACAGCGG CGGTATTGGT TGTCGGGCCG GTCGCCTTTA TCGCCCTGTC AGCCCCCCAG
ATTACCCAAC ATCTGGTAAA GGCTAACGGC ATCTCCCTGT TATGTACCGC CTTGATGGGC
GCATTTCTAT TATTGGCGTC AGACATCATA ACCTTGCTAT TACCAACATC TTCACGGCTC
CCCGTGGGCG TTATTACGGC TGCCGTCGGG GGGATTTATC TGATGAGCTT GCTATACGCC
AAAGTGAGGA AAACAAAGTG A
|
|---|
| Protein sequence | MHPVDSVRTL TLGSWVFLAP ARRTGVYLLL IWPILLLCLT AALMLSPSGF EGGKMLAVLA
GEGSQYEEFI LLQLRLPRAL VALGAGAALA ISGAIFQTTT HNALASPDII GITAGASAGV
VATLLLWPGV MPVPLGAFIG ACTAVALVYA GSMSILSHPE RIIISGIAVG AVCIAFVNFA
TSQVRLEQAS QLAALLSGSL AEKNWRDVGI ISLTLGLVMP GLVYLSRQLN YLSLGAAVAQ
PLGVNIRQTH WLGLLVAIAL ATAAVLVVGP VAFIALSAPQ ITQHLVKANG ISLLCTALMG
AFLLLASDII TLLLPTSSRL PVGVITAAVG GIYLMSLLYA KVRKTK
|
|---|
| |