| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2539 |
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| Symbol | |
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| ID | 6088551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2781473 |
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| End bp | 2783734 |
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| Gene Length | 2262 bp |
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| Protein Length | 753 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641597607 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001721269 |
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| Protein GI | 170024764 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATAC TAGAAAAAAA TCACGGCAAA AGCCGAGTGC GTTTTAACTG CACACACACT
ATCAAACCAG CGGCATGGGT GCTTGCTGCT AATGTATCGT TGTTGGGTTG TGCATATGCC
GCGACTGACG AGAATAATAG TCAGAAAAAA GAAAGAGAAA ACAACCCTGC GAATACCACC
ATAACCGTTA CGGCATCACC ATTGCGTCAT GCTGGCGTCA CAGAAGACAG TGGCAGCTAC
AACACGTCAT CAATGTCGAC AGCAACTGGC CTGAATATTT CAGCACGGGA AACCCCACAG
TCGGTAAGTG TTATGACTAA ACAGCGCATG CGTGATCAAA ACCTGAACAG CGTCGAAAGT
GCCGTGAATA ACATCACCGG CATCAGTGTG CGCCAGTTTG ACAGTGATCG TTTCGGTTTT
ACCTCTCGTG GCATGGCCGT TAATAATGTT ATGCGAGATG GCGTCGCCAC CTTTTACGAT
ACCCGCTTTA ATTATGGTGA TAACACGCTT GATACCGATA TGTTTGATCG TATTGAAGTG
GTTCGAGGTG CGGCAGGCTT AATGGCTGGG CCGGGTAACC CTTCCGCCGT TATTAACCTT
GTGCGCAAAC GCCCCACACA GGATTTTCGC GGCAGTGTGT CGGCAGGTGT TGGTTCATGG
GAGAAATGGC GTACGGCGCT AGATATCTCC GGCCCCCTCA ATAGTGAAGG CAGTGTGCGC
GGGCGTTTTG TCACGGCTTA TGAAGATAAG AACTCTTTTG TTAACCGCTA TGATCAAAGT
AAAAACCCGT TTTACGGTAT CTTGGAGATA GATGTCACCC CCAATACCCT ATTCACCTTT
GGTGCCGATA CACAACGGAC TCTAACCCGG GGCGGTATGT TTGGTGGGCT TCCCCTGTTT
AACAGCGCTG GTGGGCGGAC AAATTATGCC CAATCCGCCA CCACCGCATC GGATTGGGCA
TCCGCCGAAA CCCGAACTCA AACGCTGTTT AGCAGTCTGC AACACAATTT TGATAACGGC
TGGAATATTA AAGGCACCTT TACCTTTGAT AACGATAAGC TGCGCCAAGA CGTGATGTGG
CCCACCGGTT ATCCCGACCC ACAAACCAAC ATAGGTATGC GGCCAGGCAG TCTGTCACTG
ATTGATGGTG CCCGCCGTCA GCAAAATTAC GATATTCAAG TCAATGGTCA GTACAGCCTG
TTTGGCCGCC AACATCAGTT GGGTTTGGGC TGGAATCGTC AACGACAAAA TATTGATAAC
GACTATTATC TGGCGACCTG TAATGCCACC AGAACCTGTC CCGACCTTGG GGATTTCACC
CTGCCGGGCT GGCAATATCC TAAGCCTGTT TGGAGTGATA AACGGGCTTA TGGTTCGAAA
GGGCGCAGCG ATCAATCCTC GCAGTATGTG GTGACCCAAC TCTCTCTGAT TGACCCGTTA
ACCTTGATCC TTGGTGGCCG CCTGACCACT TGGGAAACCC GTGGTGATAA CTTCGGTACG
CCACAAAATG CTCGTTATAA GAATGAGTTT GTCCCATACA GCGGCCTGAC TTATGACATT
AATCACGATT TGTCGGTTTA TACCAGTTAT ACCGAAATAT TTAACCCGGA AAACCGTCGG
GACCGTAATA ACACATTATT GGCCCCGGTG AGTGGGCAGA ATTACGAAGC CGGTTTGAAA
GGTGTTGCCT TCGATAATAG TCTTGATTAT TCACTGGCAG TGTTTGAAAT CCGTCAGAAT
AATATGCCCG TACCGGACAC CACCGCCCCC CGCTTGCCGG ATAACAGCCA GCCTTACTTC
GCCGTCGACG GTACTAAAAC CCGTGGTTTT GAAGCGGAAG TCAGTGGAAA AATGACTGAA
GACTGGAATA TTTCTGCGGG CTATACCCAG TACAACGTGA AACTGCCGAG CTCAAATACC
CAGACACCTG TCACCCCAGT CACACCACGG AAAGTCTTAA AACTCTTCAC CACCTATACC
TTACCGGGGC AACTAAACGA TCTGACCCTC GGCGGTGGCG TCAACTGGCA AAGCCAAATC
GCCAGAAACC TCAGTAGCCC AATCGGTATT CAACAAATCG GTCAAGGCAG TTTTGCCATT
TACAGCCTGA TGAGCCGCTA CCAGTTTACC CCTCAGCTCT CCTTAACGGT CAATCTGGAT
AACCTGTTTA ATCAGCATTA CTACACACAA ATCGGCCAAT ACAACCAATA CTTGTTAGGC
GCACCACGCA ATGTCGATGC CACCGTGCGC TACACCTTCT AA
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| Protein sequence | MRILEKNHGK SRVRFNCTHT IKPAAWVLAA NVSLLGCAYA ATDENNSQKK ERENNPANTT
ITVTASPLRH AGVTEDSGSY NTSSMSTATG LNISARETPQ SVSVMTKQRM RDQNLNSVES
AVNNITGISV RQFDSDRFGF TSRGMAVNNV MRDGVATFYD TRFNYGDNTL DTDMFDRIEV
VRGAAGLMAG PGNPSAVINL VRKRPTQDFR GSVSAGVGSW EKWRTALDIS GPLNSEGSVR
GRFVTAYEDK NSFVNRYDQS KNPFYGILEI DVTPNTLFTF GADTQRTLTR GGMFGGLPLF
NSAGGRTNYA QSATTASDWA SAETRTQTLF SSLQHNFDNG WNIKGTFTFD NDKLRQDVMW
PTGYPDPQTN IGMRPGSLSL IDGARRQQNY DIQVNGQYSL FGRQHQLGLG WNRQRQNIDN
DYYLATCNAT RTCPDLGDFT LPGWQYPKPV WSDKRAYGSK GRSDQSSQYV VTQLSLIDPL
TLILGGRLTT WETRGDNFGT PQNARYKNEF VPYSGLTYDI NHDLSVYTSY TEIFNPENRR
DRNNTLLAPV SGQNYEAGLK GVAFDNSLDY SLAVFEIRQN NMPVPDTTAP RLPDNSQPYF
AVDGTKTRGF EAEVSGKMTE DWNISAGYTQ YNVKLPSSNT QTPVTPVTPR KVLKLFTTYT
LPGQLNDLTL GGGVNWQSQI ARNLSSPIGI QQIGQGSFAI YSLMSRYQFT PQLSLTVNLD
NLFNQHYYTQ IGQYNQYLLG APRNVDATVR YTF
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