Gene YPK_2529 details

Gene Information

• Locus tag: YPK_2529
• Symbol: hisH
• ID: 6088504
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2771211
• End bp: 2771801
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641597597
• Product: imidazole glycerol phosphate synthase subunit HisH
• Protein accession: YP_001721259
• Protein GI: 170024754
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0118] Glutamine amidotransferase
• TIGRFAM ID: [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.760686
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGTGG TGATCCTGGA TACCGGTTGT GCCAATCTCT CCTCTGTCAC CTATGCGGTA 
CAGCGTTTGG GTTATACACC GGTTATCAGC CGCGACCCGG CAGTCGTCTT GCGAGCAGAC 
AAACTGTTTA TGCCGGGTGT GGGCACCGCC CATGCCGCCA TGGAACAATT GAGGCAACGC 
GAGCTTATCG AACTGATCAA AAGTTGTACT CAACCCGTGC TGGGGATCTG CCTTGGTATG 
CAGTTGCTGG CAACCAGCAG TGAGGAAAGT GGCGGGATCA CCACCCTCGG GATGATTGAT 
GCACCAGTAA AAAAGATGAC TGATTTTGGT TTGCCGCTGC CGCATATGGG GTGGAATCAG 
ATTACCGCAC AAGCCGGTAA CCATCTGTTC CGTGGTATCC CTGACGGAAC CTATTTCTAC 
TTCGTGCATG GATATGCAAT GCCAATATGC CCAAATACCA TCGCCCAAAC CAACTACGGC 
GAGCCATTTA CCGCCGCAGT AGAAAAAGAC AACTTCTTTG GCGTGCAGTT TCATCCGGAA 
CGTTCCGGAG CGGCTGGGGC CCAATTGATG AAAAACTTTC TGGAGATGTA A 

 

Protein sequence

MDVVILDTGC ANLSSVTYAV QRLGYTPVIS RDPAVVLRAD KLFMPGVGTA HAAMEQLRQR 
ELIELIKSCT QPVLGICLGM QLLATSSEES GGITTLGMID APVKKMTDFG LPLPHMGWNQ 
ITAQAGNHLF RGIPDGTYFY FVHGYAMPIC PNTIAQTNYG EPFTAAVEKD NFFGVQFHPE 
RSGAAGAQLM KNFLEM