Gene YPK_2506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2506 
SymbollldD 
ID6087362 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2741665 
End bp2742810 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content55% 
IMG OID641597574 
ProductL-lactate dehydrogenase 
Protein accessionYP_001721236 
Protein GI170024731 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTT CTGCCTCAAC GGATTATCGT GCCGCCGCGC AGCGTAAATT GCCGCCGTTT 
CTTTTCCACT ACATCGACGG TGGTGCGTAC AACGAACAAA CTCTACGGCG CAATACCGCC
GATTTGGCTG ATATCGCCCT GCGCCAGCGT GTGCTGAAGA ACATGTCTGA ACTGAGTCTG
GAAACGCAGC TTTTCGGCGA GACGCAGGCA ATGCCTGTTG TCCTTGGGCC AGTCGGTCTG
AGCGGCATGT ACGCACGGCG TGGTGAAGTG CAGGCCGCGC GGGCGGCGGA TAAAAAAGGT
ATTCCTTTCA CCCTCTCAAC CCTTTCGGTT TGCCCTATCG AAGAGGTGGC TCCTGCCATT
GCCCGGCCAA TGTGGTTTCA GCTTTATGTC CTGAAAGATC GGGGTTTTAT GCGTAATGCA
CTGACGCGTG CACAGGCCGC TGGCGTGAAG ACGTTGGTGT TTACCGTAGA TATGCCGGTA
CCTGGCGCAC GTTACCGCGA TGCACACTCT GGTATGAGTG GGCCGAATGC TGCCGCTCGC
CGCTTGCTTC AGGCGATAGC CCACCCACAG TGGGCTTGGG ATGTGGGCTT AAACGGCAAG
CCCCATGACT TGGGGAATAT ATCGGCCTAT CTCGGTAAGC CAACCACGCT GGAGGATTAT
ATGGGTTGGA TAGCGACAAA TTTCGACCCA TCGATCTCGT GGAAAGATTT GGAGTGGGTA
CGTGAGTTCT GGCAAGGGCC GATGATCATT AAAGGTATTC TCGATCCGGA AGATGCCAAA
GATGCAGTGA AATTTGGTGC TGATGGCATT GTGGTGTCAA ACCACGGCGG GCGTCAGCTT
GACGGTGTGC TCTCCACCGC TCGTGCCTTG CCAGCCATTG CAGATGCTGT CAAAGGGGAT
ATCACTATTC TGGCTGATTC CGGCATCCGT ACTGGGTTGG ACGTCGTACG AATGATAGCG
CTCGGCGCGG ATAGCGTGTT GTTAGGCCGT GCCTTCGTCT ATGCTCTGGC CACCGCAGGA
GAAGCCGGTG TTATCAATCT GCTGACGCTG ATCGAGCAAG AAATGCGTGT GGCGATGACG
TTGACCGGAG CGAAGCGAAT TGCCGATATC AACCGGGATT CTTTGGCAGT AAGTGAACGG
GGGTAA
 
Protein sequence
MIISASTDYR AAAQRKLPPF LFHYIDGGAY NEQTLRRNTA DLADIALRQR VLKNMSELSL 
ETQLFGETQA MPVVLGPVGL SGMYARRGEV QAARAADKKG IPFTLSTLSV CPIEEVAPAI
ARPMWFQLYV LKDRGFMRNA LTRAQAAGVK TLVFTVDMPV PGARYRDAHS GMSGPNAAAR
RLLQAIAHPQ WAWDVGLNGK PHDLGNISAY LGKPTTLEDY MGWIATNFDP SISWKDLEWV
REFWQGPMII KGILDPEDAK DAVKFGADGI VVSNHGGRQL DGVLSTARAL PAIADAVKGD
ITILADSGIR TGLDVVRMIA LGADSVLLGR AFVYALATAG EAGVINLLTL IEQEMRVAMT
LTGAKRIADI NRDSLAVSER G