| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2493 |
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| Symbol | |
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| ID | 6089285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2725656 |
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| End bp | 2727782 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641597560 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_001721223 |
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| Protein GI | 170024718 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACTA CCTTTGTCAG ATTATCCAGC CGTTCTTCTG ACATGATCGT GCGCTGCTCT
CCCTACGCAG AAATTGTTTA CTGGGGTAAG CCTCTGCTTG ATTACTCGCC TGCGATGATG
GAAGCCTTAA ACCGCCCGGT CGCTAACAGC CGCCTGGACA GCGATATACC GTTGACGCTC
TGCCCTGAAA ATGGCCGAGG GCTGTTCAGC GTGCCCGGTA TGGAGGGAAA CCGTGATGGC
GAAGATTGGT CTCCCATTTT CACCAGCCAG AGCCATACAC TTGAAAACAA TTTATTAACG
ATTATTAGCG AAGATACGAG CGCGGGCTTG CGGCTGGTGA GTGAGTTGCA GATGTGCCCA
GACAGTGGCG TGATAAAAAC CCGCAATACG CTGACCAATA TTAAAGCCGG ATGCTACCGA
ATCGATCGGT TGGCCGTGAC CTTGCCTTTT CCGGAACGTG CCAATGAAAT CATGGCCTTC
AATGGCCGTT GGATTAAAGA GTTCCAGCGC CACTCACTTA AACTCGATCA TGGCGGTTAT
ATTCAGGAAA ATCGGCGCGG CAGAACCTCA CATGAATATT TTCCCGGCAT GGTAGTAGGG
AAAGCAGGCT TCAGTGAGCA ACAGGGCGAG GTCTGGGGCT TGCATCTGGC CTGGAGTGGA
AACCATCGTT TACGCGCTGA CTGTAAAAGT GATGGCCGCC GTCAGGTGCA GGCCGAAGCC
CTCTATTTTT CCGGTGAAAT CGTTCTGGAA CACTTGCAGA GTGTCAGTAC CCCGTGGGTC
TACGCGACCT ATTCCGCTAC CGGGTTGAAC GGTATGAGCC ACAGTTTTCA TCACTATGTG
CGCCAGAATA TCGTGCCATC ACTGGCAGAA AAACCGCGCC CGGTGCACCT CAATACCTGG
GAAGGCATCT ATTTTAAGCA TGACCCAGAC TACATTATTC AGATGGTGAA AAACGCGGCC
AAAATTGGTG TGGAGCGCTT TATCATTGAT GATGGCTGGT TCAAAGGACG CAACAACGAT
TTAAGTTCAC TGGGCGATTG GTATATTGAT GCCGAAAAAT ACCCACAGGG ACTGAACCCC
ATTATTGAAG CCGTGAATGA ATACGGTATG GAGTTTGGTA TCTGGGTGGA ACCTGAAATG
ATCAATCAGG ATTCTGATTT ATACCGTAAT CATCCTGACT GGGTGCTGAA ACTTGACGGC
TACCCGCTAC TGAAAGGACG CGACCAACTG TTGCTCGATT TATCGAACCC GGCCGTTTTC
GACTACCTGC TAGAACGCTT GAGCTGGTTG TTGGGCGAAC ACAAAGTTGA CTATGTTAAA
TGGGATTTCA ACCGCGAGAT GGTCCAGCCC GGTCACCGCG GCCACCCTTC GTTGGTACAA
CAGACCGAGC AACTGTATCG CTTATTCGAC CAACTCAACC TGCATTTCCC ACATATTGAA
TTTGAATCCT GCGCGTCAGG CGGGGGGCGT ATTGATTATG AAATTCTGCA ACGCTGCCAC
CGTTTCTGGC CATCAGACAG CAATGACGCT CTTGATCGCC AGCAGATCCA GCGAGGGATG
AGCTACTTCT TCCCTCCAGA AGTTATGGGC GCGCATATTG GCGGTACTCC GTGCCATACC
ACCGCCAGAA TGCACTCTAT TAATTTTCGG GGGCTGACAG CGCTGTTCGG CCATATGGGG
GTCGAGCTTG ATCCGGTGAG TGAATCTCCT GCCGAGCAAC AGGCTTTTGC CCGTTATATT
GCGCTACATA AACAACTGCG GCCGCTGTTA CATAGCGGAA ACACGATCCG GCTCGACCAT
CCGGATAAAA CAACATTAAT TAATGCCGTT ATCGCACACG ACCAGCAGCA AGCTGTCGTC
CTGATCAGCC AGCTAGCACT ACCGGAATAT GCCTTATGTG GCAACGTATT GATTCCTGGT
CTTAACCCAT CCACACACTA TCAGATCGAG GTTCTGGACA TGCCTGACAG CATGCACAAA
CCACGAAATA ACACCATGAA GCGCTATCCA GCCTGGTTGA AAAGCCCGCT CATCGTCAGT
GGCGATTGGC TAGAGAAAGC AGGAATTGCC CTTCCCATCC TCAATCCTGA ATCGGCTATC
CTGATACAGC TTTCAGCCGT AAATTAA
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| Protein sequence | MNTTFVRLSS RSSDMIVRCS PYAEIVYWGK PLLDYSPAMM EALNRPVANS RLDSDIPLTL
CPENGRGLFS VPGMEGNRDG EDWSPIFTSQ SHTLENNLLT IISEDTSAGL RLVSELQMCP
DSGVIKTRNT LTNIKAGCYR IDRLAVTLPF PERANEIMAF NGRWIKEFQR HSLKLDHGGY
IQENRRGRTS HEYFPGMVVG KAGFSEQQGE VWGLHLAWSG NHRLRADCKS DGRRQVQAEA
LYFSGEIVLE HLQSVSTPWV YATYSATGLN GMSHSFHHYV RQNIVPSLAE KPRPVHLNTW
EGIYFKHDPD YIIQMVKNAA KIGVERFIID DGWFKGRNND LSSLGDWYID AEKYPQGLNP
IIEAVNEYGM EFGIWVEPEM INQDSDLYRN HPDWVLKLDG YPLLKGRDQL LLDLSNPAVF
DYLLERLSWL LGEHKVDYVK WDFNREMVQP GHRGHPSLVQ QTEQLYRLFD QLNLHFPHIE
FESCASGGGR IDYEILQRCH RFWPSDSNDA LDRQQIQRGM SYFFPPEVMG AHIGGTPCHT
TARMHSINFR GLTALFGHMG VELDPVSESP AEQQAFARYI ALHKQLRPLL HSGNTIRLDH
PDKTTLINAV IAHDQQQAVV LISQLALPEY ALCGNVLIPG LNPSTHYQIE VLDMPDSMHK
PRNNTMKRYP AWLKSPLIVS GDWLEKAGIA LPILNPESAI LIQLSAVN
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