Gene YPK_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2421 
SymbolflgF 
ID6087373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2654029 
End bp2654784 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content56% 
IMG OID641597487 
Productflagellar basal body rod protein FlgF 
Protein accessionYP_001721151 
Protein GI170024646 
COG category[N] Cell motility 
COG ID[COG4787] Flagellar basal body rod protein 
TIGRFAM ID[TIGR02490] flagellar basal-body rod protein FlgF
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.778215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCACG CAATATATAC CGCAATGGGG GCTGCCCGGC AGTCTCTGGA GTTGCAGGCC 
GTTACCGCCA ACAATTTGGC GAACGCCTCT ACGCCAGGCT TTCGTGCGCA ATTGGCTGCG
ATGCGCGCGG TACCCATTGA TGGGCCAAGT CTGGCCACCC GCACGATGGT CACCACATCA
ACTCCCGGTG TGGATATCAG CCAGGGGACG ATGAATTTCA GTGGTCGCCC GCTGGATGTT
GCCTTGCAGC AGGACGGCTA TCTGGCGGTA CAACTGCCCG ATGGCAGCGA AGCCTACACG
CGCAACGGTA ATATTCAGAT TTCTGCTAAC GGGCAGATGA CGGTACAGGG CTACCCATTG
ATGGGGGATA ACGGCCCGAT TGACGTCCCG CCCCAAGCAG CAGTCACTAT TGCGGCGGAT
GGCACTATCT CGGCGCTGAA TGCCGGTGAT TCACCAAACA CCATTGCGCA ACTGGGTCAG
ATCAAACGGG TTCAGGCGAC GGCGGGTGAA ATGATGCACG GCGATGATGG CTTGTTCCAT
TTGACCCCGG AGACTCAGCA GGCGCGGGGC GCGCAATTGC CCAATGATCC GCTCGTAAAA
ATCATGCCGG GGGTACTGGA AGGCAGTAAC GTGAAAGCCG TTGAAGCCAT GACGGACATG
ATTGCCAACG CCCGCAGTTT CGAAATGCAA ATGAAAGTCA TCCAGAGCGT GGATGAAAAC
GAACAGAGCG CGAACCAACT GTTAGCAATG AGTTAA
 
Protein sequence
MDHAIYTAMG AARQSLELQA VTANNLANAS TPGFRAQLAA MRAVPIDGPS LATRTMVTTS 
TPGVDISQGT MNFSGRPLDV ALQQDGYLAV QLPDGSEAYT RNGNIQISAN GQMTVQGYPL
MGDNGPIDVP PQAAVTIAAD GTISALNAGD SPNTIAQLGQ IKRVQATAGE MMHGDDGLFH
LTPETQQARG AQLPNDPLVK IMPGVLEGSN VKAVEAMTDM IANARSFEMQ MKVIQSVDEN
EQSANQLLAM S