Gene YPK_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2348 
Symbol 
ID6088701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2581037 
End bp2581552 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content53% 
IMG OID641597410 
Productphage major tail tube protein 
Protein accessionYP_001721078 
Protein GI170024573 
COG category[R] General function prediction only 
COG ID[COG3498] Phage tail tube protein FII 
TIGRFAM ID[TIGR01611] phage contractile tail tube protein, P2 family 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAC CACGCAAGCT TAAGTTCCTC AATGTGTTCA ATGACGGGAA CAGCTATCAG 
GGGGTGGTTG AATCCATCAC CTTGCCAAAA TTAAACCGCA AATTTGAAGA CTTTCGCGGG
GGCGGGATGA ATGGCAGCGC CAAGGTTGAC CTGGGCCTTG CTGATGGGGC GCTGGACGTT
GACTGGACGC TGGGCGGTAT TGAGTCCGAG ATCTACAAGC AATGGGGCGT GACCAAAGTC
GATGGCGTGT TACTGCGTTT TGCTGGCTCC TATCAGCGCG ACGATACCGG CGAAACCCAC
GCGGTAGAAA TTGTCCTCCG TGGTCGTCAT GAGGAGATCG ACGGCGGTGA CAGCAAACAA
GGCGATAACA GCACCACAAA AATCTCCACA AAATGTACTT ACTACAAATT GACATGGGAT
GGCGAAGTGC TGATCGAGAT CGACATTGTG AACATGGTCG AAATGGTCAA CGGCGTCGAT
ATGCTGGAAG CCCACCGCCG CAACATCGGC CTGTAA
 
Protein sequence
MALPRKLKFL NVFNDGNSYQ GVVESITLPK LNRKFEDFRG GGMNGSAKVD LGLADGALDV 
DWTLGGIESE IYKQWGVTKV DGVLLRFAGS YQRDDTGETH AVEIVLRGRH EEIDGGDSKQ
GDNSTTKIST KCTYYKLTWD GEVLIEIDIV NMVEMVNGVD MLEAHRRNIG L