Gene YPK_2341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2341 
Symbol 
ID6089164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp2575293 
End bp2575928 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content54% 
IMG OID641597403 
Productphage baseplate assembly protein V 
Protein accessionYP_001721071 
Protein GI170024566 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.962217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATCC TTATTGCTGG TCTTAAACGC CTGTTGGCTA ACATTATCCG TATTGGCATC 
GTCTCAGACG TCGATCTTGC TAACGGATTA TGTCGGGTCA AAATGGGCAA CCTGGAAACC 
GATTGGCTTA ATTGGTTAAC CCTGCGCGCC GGGCGGGTGC GTTTTTGGTC TGCGCCATCG 
CTGGGTGAGC AAGTCATGGT GATCAGTATC GGTGGTGAGC TCACCACCGG TTTTGTGCTG 
CCCGCTGTTT TCTCTGATGC CAATCCAGCC CCGTCACAAT CCGCCGACGC TATCGTGATC 
ACCTTCCCCG ACGGCGCCCG TTTTGAGTAC GAGCCAGAAA CCAGTCACCT GGCCGTAACC 
GGAATAGCAA TAGCGGTGAT TGAGGCTGGC GAATCTATCC ATGCTACCGC CCCCAACATT 
ACCTGTACCG CCTCGGTCAA AATCACACTG GACACACCCG AAGTGGAATG CACCAACAAC 
CTGACGACGG CCACCTTAAA CGTGAAAAGC GGCGGCCAGA TGAGCGGCGA CATCAGGCAT 
TCCGGCGGTC AGTTTTCATC TAATGGCGTG ATCGTTGATA ACCACAGCCA CGGCGGTGTT 
GAGCGCGGTG GCGCTGATAC GACAGGAACA AAATGA
 
Protein sequence
MNILIAGLKR LLANIIRIGI VSDVDLANGL CRVKMGNLET DWLNWLTLRA GRVRFWSAPS 
LGEQVMVISI GGELTTGFVL PAVFSDANPA PSQSADAIVI TFPDGARFEY EPETSHLAVT 
GIAIAVIEAG ESIHATAPNI TCTASVKITL DTPEVECTNN LTTATLNVKS GGQMSGDIRH 
SGGQFSSNGV IVDNHSHGGV ERGGADTTGT K