17 homologs were found in PanDaTox collection
for query gene YPK_2335 on replicon NC_010465
Organism: Yersinia pseudotuberculosis YPIII



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010465  YPK_2335  putative LysB-like protein  100 
 
 		 140 aa  275  2e-73  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.0437972  n/a   
 
 
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CP001509  ECD_00836  putative Regulatory protein  50.79 
 
 		 142 aa  117  7.999999999999999e-26  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_00843  hypothetical protein  50.79 
 
 		 142 aa  117  7.999999999999999e-26  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A3041  phage lysis timing protein LysB  55.65 
 
 		 142 aa  115  1.9999999999999998e-25  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  hitchhiker  0.00072276 
 
 
-
 
NC_009800  EcHS_A0933  putative LysB protein  51.97 
 
 		 142 aa  112  2.0000000000000002e-24  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_011149  SeAg_B2859  putative regulatory protein  50 
 
 		 141 aa  107  4.0000000000000004e-23  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_2769  lysis-like protein  51.75 
 
 		 142 aa  107  5e-23  Escherichia coli ATCC 8739  Bacteria  normal  0.0175692  decreased coverage  0.0000189882 
 
 
-
 
NC_012912  Dd1591_1525  putative phage encoded host lysis, regulatory protein  47.24 
 
 		 146 aa  103  7e-22  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2112  putative phage encoded host lysis, regulatory protein  53.41 
 
 		 149 aa  94  6e-19  Dickeya dadantii Ech703  Bacteria  normal  0.0421209  n/a   
 
 
-
 
NC_012917  PC1_3179  putative P2 LysB-like protein  38.52 
 
 		 148 aa  82  0.000000000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.172208  n/a   
 
 
-
 
NC_012560  Avin_37530  Phage P2 LysB-like protein  42.11 
 
 		 140 aa  74.7  0.0000000000004  Azotobacter vinelandii DJ  Bacteria  normal  0.441019  n/a   
 
 
-
 
NC_009997  Sbal195_2907  hypothetical protein  47.37 
 
 		 156 aa  74.3  0.0000000000005  Shewanella baltica OS195  Bacteria  hitchhiker  0.00540344  normal  0.471124 
 
 
-
 
NC_011353  ECH74115_3043  phage lysis timing protein LysB  43.12 
 
 		 141 aa  73.9  0.0000000000007  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  hitchhiker  0.0000220172 
 
 
-
 
NC_010498  EcSMS35_4332  phage lysis timing protein LysB  41.28 
 
 		 141 aa  68.2  0.00000000004  Escherichia coli SMS-3-5  Bacteria  normal  1  hitchhiker  0.00690858 
 
 
-
 
NC_007963  Csal_1391  hypothetical protein  38.83 
 
 		 155 aa  60.5  0.000000007  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.834357  n/a   
 
 
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NC_007650  BTH_II1342  protein lysB  37.65 
 
 		 146 aa  55.5  0.0000003  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
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NC_011080  SNSL254_A4373  phage lysis regulatory protein  38.46 
 
 		 137 aa  50.1  0.000009  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.280847  hitchhiker  0.0000000291923 
 
 
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