Gene YPK_2296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2296 
Symbol 
ID6087716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2543422 
End bp2543781 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content52% 
IMG OID641597358 
Productbaseplate assembly protein V 
Protein accessionYP_001721026 
Protein GI170024521 
COG category[R] General function prediction only 
COG ID[COG4540] Phage P2 baseplate assembly protein gpV 
TIGRFAM ID[TIGR01644] phage baseplate assembly protein V 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.107943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAGA TATTAGCATT CATACTTTAT TTCATTTCCT TTGTGCCATC CCTCACACAA 
AACCCATCAC ATGCCGCGCG CGCCCGTAGG CGGCACACTG GCCGTATGAA TATCCTTATT
GCTGGCCTTA AACGCCTGTT GGCTAACATT ATCCGTATTG GCATCGTCTC AGACGTCGAT
CTTGCTAACG GATTATGCCG GGTCAAAATG GGCAACCTGG AAACCGATTG GCTTAATTGG
TTAACCCTGC GCGCCGGGCG GGTGCGTTTT TGGTCTGCGC CATCGCTGGG TGAGCAAGTC
ATGGTGATCA GTATCGGCGG CGTGCAGCGT GGTGGCGATT GGACTGAGGG GGTTAAATGA
 
Protein sequence
MQEILAFILY FISFVPSLTQ NPSHAARARR RHTGRMNILI AGLKRLLANI IRIGIVSDVD 
LANGLCRVKM GNLETDWLNW LTLRAGRVRF WSAPSLGEQV MVISIGGVQR GGDWTEGVK