| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2292 |
|---|
| Symbol | |
|---|
| ID | 6089043 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2540798 |
|---|
| End bp | 2541658 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641597354 |
|---|
| Product | transposase mutator type |
|---|
| Protein accession | YP_001721022 |
|---|
| Protein GI | 170024517 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3328] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0121086 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAAA AGAAACTTAA AGCACTTGCG GCTGAACTGG CTAAAGGTCT TAAAACCGAA
GCCGACCTTA ATGTATTTTC TCGTATGCTG ACAAAGCTTA CCGTCGAAAC AGCGTTAAAT
GCCGAGCTTA CCGAACACCT CGGGCACGAG AAAAATACCC CCAAAACAGG CTCAAATACT
CGCAATGGTT ACTCGTCTAA AACGTTGCTG TGCGACGATG GCGAGGTTGA ACTCAGCACG
CCCCGTGACA GTGAAAACAC CTTCGAGCCT AAGCTAATAA AGAAAAACCA GACGCGCATC
ACGCAGATGG ACAGCCAGAT TTTATCCCTG TACGCCAAAG GCATGACCAC GCGGGAAATC
GTCGCCACCT TCAAGGAGAT GTACGACGCT GACGTGTCGC CCACATTGAT ATCTAAAGTC
ACCGATGCGG TCAAAGAGCA GGTCACTGAG TGGCAAAATC GCCCTCTGGA TGCGCTGTAC
CCCATTGTTT ATCTTGATTG CATTGTGGTA AAAGTTCGTC ACAACGGCAG TGTAATTAAC
AAAGCCGTGT TCCTCGCGTT GGGCATTAAT ACCGAAGGCC AAAAGGAGCT ATTGGGCATG
TGGCTGGCCG AAAACGAAGG CGCGAAATTC TGGCTAAGTG TGCTGACAGA GCTTAAAAAC
CGGGGTCTGC AGGATATCCT GATTGCTTGT GTGGACGGTC TGAAAGGCTT CCCGGATGCG
ATAAACAGCG TTTATCCGCA GACGCATATC CAGCTCTGCA TCATCCATAT GGTACGCAAC
AGCCTGAAAT ATGTGTCATG GAAGGACTAT AAAGCCGTCA CCAGCGGTTT GAAAATGGTG
TATCAGGCTC CGACACGCTG A
|
|---|
| Protein sequence | MDEKKLKALA AELAKGLKTE ADLNVFSRML TKLTVETALN AELTEHLGHE KNTPKTGSNT
RNGYSSKTLL CDDGEVELST PRDSENTFEP KLIKKNQTRI TQMDSQILSL YAKGMTTREI
VATFKEMYDA DVSPTLISKV TDAVKEQVTE WQNRPLDALY PIVYLDCIVV KVRHNGSVIN
KAVFLALGIN TEGQKELLGM WLAENEGAKF WLSVLTELKN RGLQDILIAC VDGLKGFPDA
INSVYPQTHI QLCIIHMVRN SLKYVSWKDY KAVTSGLKMV YQAPTR
|
|---|
| |