Gene YPK_2218 details

Gene Information

• Locus tag: YPK_2218
• ID: 6089563
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2457139
• End bp: 2459124
• Gene Length: 1986 bp
• Protein Length: 661 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641597283
• Product: chorismate binding-like protein
• Protein accession: YP_001720952
• Protein GI: 170024447
• COG category: [E] Amino acid transport and metabolism; [H] Coenzyme transport and metabolism
• COG ID: [COG0147] Anthranilate/para-aminobenzoate synthases component I

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTCTTAA TTAAGTCCAC GCCACTAGAA CTGACCCGCA GAAAAAACAG ACCACCATCC 
CTATTCACCT ACACCTACAC CTACACATCT CAGGCTATAC CTTCCTCATT ATCATTTACC 
CAAGCTATAG AAACTGCCGA AATGGTGAGG CCTCAGCCAT GGGATAAAAA TCATTTATCC 
CGTTGGCCGT TGTTACATGT AGCGCTCATA TTGCCTGATA TCCGCCGCTA TCAACAACAA 
TGTGGAACCC TGCCCAACCT ACTCAAACAC ATCACGGGTT GGCCACTCCC CCCTTTTGGT 
AGGATAGATA GTCAACATTT ATCTGCTCAG GCCCGAGAGC CTCTCCCAGA GGGAGTAACA 
TCGCCCATGC CCTGCTCTGG AGAACCGCTT TACTATGCGC AGTGTCAACA AACGATCTGT 
GCTCCCCCAC TGACAATGGC GACAAAATTA GTCCAGCGTT ATCAAGAGGG TGCCCGCAAT 
ATCTCTCACA GTAAAAGCGG CTCAGAAGGA TATTCGTCAC TCACTGACAA TGAAGAATGG 
CAACCTTACG CTATCTATGA AAAAGACGGT GAGTTCTCGG TCGGTATTGG GCTGGCGGCA 
CTGATAACTG TCTATCCTAA TTATGTTCAC ATACGTTACC AGCAGCAAAA TGCTCATGGC 
GATAGCTTTA GCGGCGAACA ATTTCAAGAG CGTGTTTGGT TATCCTCCGA CATCGTCGGT 
AATATTTCAT CCGCACTGGC AAGTATCCCG ATTAAAGAGT GGCGAGCTTA TGGTCTCAGC 
CAATTGGAAT TGGTTCATCT CTTCCATAAC CCGGCGTCTC ACGCGGCTCC CGGTACCGCA 
CTACTGCAAA TTTTCCTTCC ACTGCATGAA TATAGACTCA ATCGCGGCAG CGCTATAATA 
CGCAGTTTGC TTCCCTCTCA CTTACCCCAA CTGCTTACGA TGCTGCAGCA ATGTGACAGT 
GACCAATATG ACAACGCCCC CGCTATCAAC AACTCATCTA TCTATAAATC ATCTAGTTGT 
GAACCATCTA TTTATGAGTC ACCAATTCAT GAGCCATCTA TTCATGAACA ACCTGGCGAT 
GAATATGATG AAAATAATCA ACGTGACCAT AATCAAGACA GCCACCTGCA GACACAAGTA 
GAAAGAAGCG CCATCGAAAT GCAGATACGC CAAACTGACC CTACTATTTT CTGTGATCGG 
GTAGCAAAAA CCGTTAATGA AATCAGGCAA GGTAAATATC AGAAAGCCAT TTTATCGCGC 
CAGATACCGC TGCCAAATAA TATTAATTTA CTCGCAAGCT ACCAACGTGG GCGCATAAAT 
AACACCTCGG CACGCTCCTA TGCTTTCCGG ATGCAAGGAT TTGAATTAAT GGGCTTTAGC 
TCAAAGACTG CCGTGACTGT CTCAGCCAAT GGCTGTCTGA GCACCCAACT TTTAACCGAT 
ACACATGCAC TGTCGTCAGA CCAAACTCAA TCGGTGCCAC TTCATCATGA ATTACGAATT 
AATACTGAAG ATATCACTGA ACATACCAGC TCAATCCTCT CTGTTGTTGC AACGCTAACA 
CCAATCTGTG TACCAGGCTC AGTTGCCATT GTTCCGTATA TGAAGGTGCT TACTTGCGGT 
AAGGTGCAAA ATCTGGCCTC CTGTCTGCAA GGCCAGATAC AAAAAGGCAT CAGCCACTGG 
CAAGCTATGC AATCCCTGTA TCCTGTAGCT GCCGATATTC CTAAAGATCA TCTGATGCAA 
GCAACTCTTC ATGAACTGGG ATCATGGGAG GCCTATAGCA GCAGCGTGCT AATGGTTGAC 
AGCAATGGTG CATTGGATGC GACGCTAATT TCAGAGAGCC TTTCCCGTAA GAATAAAAGA 
TTTGGATTAC GAGCCGGAAC CGAAATCACC CATCAAGCAG ACCCCCTACT CAAGCTAGAA 
GAGACTCATG AGACGCTGAT CGCGATTGCC CGTTATCTGG TGTTGCAAAC AGCAATGACC 
GATTAA 

 

Protein sequence

MVLIKSTPLE LTRRKNRPPS LFTYTYTYTS QAIPSSLSFT QAIETAEMVR PQPWDKNHLS 
RWPLLHVALI LPDIRRYQQQ CGTLPNLLKH ITGWPLPPFG RIDSQHLSAQ AREPLPEGVT 
SPMPCSGEPL YYAQCQQTIC APPLTMATKL VQRYQEGARN ISHSKSGSEG YSSLTDNEEW 
QPYAIYEKDG EFSVGIGLAA LITVYPNYVH IRYQQQNAHG DSFSGEQFQE RVWLSSDIVG 
NISSALASIP IKEWRAYGLS QLELVHLFHN PASHAAPGTA LLQIFLPLHE YRLNRGSAII 
RSLLPSHLPQ LLTMLQQCDS DQYDNAPAIN NSSIYKSSSC EPSIYESPIH EPSIHEQPGD 
EYDENNQRDH NQDSHLQTQV ERSAIEMQIR QTDPTIFCDR VAKTVNEIRQ GKYQKAILSR 
QIPLPNNINL LASYQRGRIN NTSARSYAFR MQGFELMGFS SKTAVTVSAN GCLSTQLLTD 
THALSSDQTQ SVPLHHELRI NTEDITEHTS SILSVVATLT PICVPGSVAI VPYMKVLTCG 
KVQNLASCLQ GQIQKGISHW QAMQSLYPVA ADIPKDHLMQ ATLHELGSWE AYSSSVLMVD 
SNGALDATLI SESLSRKNKR FGLRAGTEIT HQADPLLKLE ETHETLIAIA RYLVLQTAMT 
D