Gene YPK_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2195 
Symbol 
ID6088757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2432819 
End bp2433289 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content54% 
IMG OID641597262 
Productcupin 2 domain-containing protein 
Protein accessionYP_001720931 
Protein GI170024426 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT TCCTGATCAC ACTGGCTGCG CTTTTACTGC CCGGTACGCA AGCGCTTGCT 
GCTGCGCAGG CGGCAGTGAC CGTCAGTCCT GCGGGTTCAC AACCTACGAC TATTGGTGCA
CCGGAATCTT TTACCGGTAC AGCAAAAGTT GACTCACGGT TTAAAGGCAC CGCCCCAGCC
CGAATTTCCG GCGGTACCGT CTCATTCGAA GCCGGAGCAC GAACAGCATG GCACACGCAT
CCCCTTGGAC AGACACTTAT TGTTTCTTCT GGTACCGGCT GGGTACAGGA ATGGGAGGGC
GCCGCTCAGC AAATCAAAAC CGGTGATGTC GTGTGGATCC CACCGGGTGT TAAACACTGG
CATGGCGCAT CCGCAAAAGA GTCAATGGTG CATATTGCTG TTTCAGAATC ACAGGACGGT
AACACTGTGA CGTGGATGGA AAAAGTCACA GACGGCCAGT ACCCACAATA A
 
Protein sequence
MKVFLITLAA LLLPGTQALA AAQAAVTVSP AGSQPTTIGA PESFTGTAKV DSRFKGTAPA 
RISGGTVSFE AGARTAWHTH PLGQTLIVSS GTGWVQEWEG AAQQIKTGDV VWIPPGVKHW
HGASAKESMV HIAVSESQDG NTVTWMEKVT DGQYPQ