Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2169 |
Symbol | |
ID | 6088862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2407546 |
End bp | 2408412 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641597236 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001720906 |
Protein GI | 170024401 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0596162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCT GGCGCAACGA CCTGCTTGCC TGGTCGCTGA TGTTGAGTGG CCTGGGCACC ATTCTGTTAT TGATGGGTTC CACCTTTTAT GTCGTGGTGG TGCAGAGCCT CGGTTACTTC AACCTTGAAG GGGAAAGCCA TTTTTCGCTG GAGTTCTGGC GTAACATGTT GCAGGACGAG GTGCTGCATA GCGCCCTATT CTACTCGGTA AAAGTTTCGG TGCTGGGCGC GTTTGGTTCG GTAATCTTCG CGTATCCGCT GGCGTTATGG CTGCGCAAGC CGCTGATCGC TAAAGAAGGT ATTATCGCCG TGCTACGCGC ACCGATGTTT ATTCCCGGTA TGGTAGCCGC ATTTTTGTTC GTCAATATCA TCGCCTACCA CGGTGTGATT AACGAGTTGT TAATGGCACT GGGGGTTATC AACGAACCGC TGCGAATGCA AAACGATGAC TTCGGTTGGG GCGTTGTTAT TCTGCAAGTC TGGAAGAACC TGCCGTTTGC CCTGATTCTG GTGGGCGGTG CGGTCAATGC CATCCGCAAC GATGTGCTGG ACGCCGCCAG CAACCTCGGG GCCAACCGCC TACGGAGCTT TACCGGTATC GTGGTACCAC TCACATTACC TGCCGTGCAG GTGACGCTCA TTCTGGTCTT TATCGGTGCA CTGGGCGATT TCGCCTTTTT CTCGGTCGCC GGGCCGCGCA ACACATATTC TCTGGCACGT CTGATGCAAG CCACCGCTAT GGAATACGGT GAGTGGAATA ACGCTGCCGT GATCGCCGTC ATTATTATGA CCACCGCGGC TATTTTTACG CTGCTGATTG CCACTTTAAT CACACCGTTC GTCACCCGTA AAGGAGACGT CAAATGA
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Protein sequence | MKSWRNDLLA WSLMLSGLGT ILLLMGSTFY VVVVQSLGYF NLEGESHFSL EFWRNMLQDE VLHSALFYSV KVSVLGAFGS VIFAYPLALW LRKPLIAKEG IIAVLRAPMF IPGMVAAFLF VNIIAYHGVI NELLMALGVI NEPLRMQNDD FGWGVVILQV WKNLPFALIL VGGAVNAIRN DVLDAASNLG ANRLRSFTGI VVPLTLPAVQ VTLILVFIGA LGDFAFFSVA GPRNTYSLAR LMQATAMEYG EWNNAAVIAV IIMTTAAIFT LLIATLITPF VTRKGDVK
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