Gene YPK_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2117 
Symbol 
ID6088101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2348470 
End bp2348916 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content44% 
IMG OID641597185 
Producthypothetical protein 
Protein accessionYP_001720856 
Protein GI170024351 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.707271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAC CTCCTTTTTG GCAACAAAAA ACATTGGCTG AAATGTCAGA TAGTGAATGG 
GAATCATTGT GTGACGGATG CGGTCAATGC TGTTTGAATA AACTGATTGA TGAAGATACT
GACGAAATTT ACTTCACCAA TGTCGCCTGT GATCAGCTCA ATATTAAAAC CTGCCAATGC
AGTAACTATG AGCGTCGCTT TGAATTAGAA GAAGATTGCA TCAAGTTAAC GCGGGAAAAT
TTGGTGACGT TTGCCTGGTT GCCACCAACG TGTGCCTATC GCCTGATTGG AGAGGGCCAT
GATTTACCCC GTTGGCATCC GCTTTTAACG GGTTCTAAAG CTGCGATGCA TGGTGAACGG
ATCTCTGTAC GTCATATCGC AGTACGTGAG AGCGAAGTGG TTGATTGGCA AGACCACATA
TTGAATAAGC CGAGTTGGGC TAAATAA
 
Protein sequence
MSQPPFWQQK TLAEMSDSEW ESLCDGCGQC CLNKLIDEDT DEIYFTNVAC DQLNIKTCQC 
SNYERRFELE EDCIKLTREN LVTFAWLPPT CAYRLIGEGH DLPRWHPLLT GSKAAMHGER
ISVRHIAVRE SEVVDWQDHI LNKPSWAK