Gene YPK_2054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2054 
Symbol 
ID6088436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2285466 
End bp2285915 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content48% 
IMG OID641597121 
Productacyl-CoA thioester hydrolase 
Protein accessionYP_001720794 
Protein GI170024289 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.678705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAGG AACAACAACT ATCTGGCGGT GAACTTTCAT TACCTAACGG TGAGTTAGTG 
CTTCGCACTC TGGCAATGCC AGCAGACACC AACGCCAACG GGGATATATT TGGCGGTTGG
TTGATGTCTC AAATGGATAT TGGTGGCGCT ATCCAAGCTA AAGAAATTGC ACAGGGTCGC
GTTGTGACGG TTCGTGTTGA TGGCATGACG TTTCTTAAGC CTGTGGCTGT TGGTGACGTT
GTTTGCTGCT ATGCACGCTG TATTAAAACC GGGCACAGCT CTATCACCAT TAACATTGAA
GTATGGGTAA AAAAGGTTTC TTCTGAGCCA ATCGGGCAGC GTTATCGTGC TACTGAAGCG
GTATTCACCT ATGTCGCGGT TGATGATGCG GGTAAACCCC GTGGATTACC GAGCGGTAAA
GGTAATTTCG AAGTAGGTGC GACTCAATAA
 
Protein sequence
MTQEQQLSGG ELSLPNGELV LRTLAMPADT NANGDIFGGW LMSQMDIGGA IQAKEIAQGR 
VVTVRVDGMT FLKPVAVGDV VCCYARCIKT GHSSITINIE VWVKKVSSEP IGQRYRATEA
VFTYVAVDDA GKPRGLPSGK GNFEVGATQ