| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1927 |
|---|
| Symbol | |
|---|
| ID | 6089184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2138088 |
|---|
| End bp | 2138411 |
|---|
| Gene Length | 324 bp |
|---|
| Protein Length | 107 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641596998 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001720671 |
|---|
| Protein GI | 170024166 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1476] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA CAGACGATTT TGACATCATT CCTTTTGCAG TGGTTAAAGC AGCAGCGTTG
AGTCATCCGC AGGTGAATGA CGCCTATACG GATTTACAAA TTCGGCAAGC GATGATGACT
GAACTGAAAG CGGCCCGCCA ACAATGCAAT TTGACTCAAG AAGAGGTCGC ACTGCGGGCG
GGGCTGAAAA AACAAAATAT CAGTCGTATG GAGAAAGGCA TCATTTCACC TAACCTCACC
ACCTTGAGCC GTTATGCCGC AGCACTAGGA GGGACTTTCG TTTTTCAATT CAACCCAAAC
TCATCTTATG CGACTAAGGA GTAA
|
|---|
| Protein sequence | MKKTDDFDII PFAVVKAAAL SHPQVNDAYT DLQIRQAMMT ELKAARQQCN LTQEEVALRA
GLKKQNISRM EKGIISPNLT TLSRYAAALG GTFVFQFNPN SSYATKE
|
|---|
| |