Gene YPK_1857 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1857 
Symbol 
ID6089415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand+ 
Start bp2064516 
End bp2065172 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content45% 
IMG OID641596928 
Productriboflavin synthase subunit alpha 
Protein accessionYP_001720601 
Protein GI170024096 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0307] Riboflavin synthase alpha chain 
TIGRFAM ID[TIGR00187] riboflavin synthase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.462262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACCG GTATTGTTCA AGGCACCGGG CTTGTGGTGG CCATCGAAGA AAAATCTAAT 
TTCCGCACGC ATGTTGTAGA GCTGCCTATT GATATGCTGC CTGAGTTGGC ATTGGGGGCG 
TCAGTTGCTC ACAATGGATG CTGCCTCACC GTGACACATA TTGAGGGCAA TCGTGTCAGT 
TTTGATTTGA TGAAGGAAAC ATTACGCCTC ACTAACTTAG GGGATATAAA CGTTGGTGAT 
AAGGTTAATC TAGAGAGGGC GGCTAAATTC AGCGATGAAA TTGGTGGTCA TCTTATGTCC 
GGTCATATTA TCTGTACTGC AGAGATTGCT AAAATATACA CATCAGAAAA TAACCGTCAG 
ATTTGGTTTC GTATGCCCAG CGAAGATCTA ATGAAATATG TGTTACATAA AGGTTTTATT 
GGTATTGATG GCATCAGCCT GACAATCGGC GAGGTGGTGG GTAATCGTTT CTGTGTTCAT 
CTCATTCCAG AAACGTTGTC TCGAACCACA CTGGGTAAAA AGCGGTTAGG GCACCGGGTT 
AATATCGAGA TAGATCCGCA GACCCAAGCG GTGGTTGATA CTGTTGAACG GGTATTGGCG 
CAGCGCAATA TGGCTAACGC GGCGTTAGTG GACGAAAAAG TCGTACGGGT GTCATAA
 
Protein sequence
MFTGIVQGTG LVVAIEEKSN FRTHVVELPI DMLPELALGA SVAHNGCCLT VTHIEGNRVS 
FDLMKETLRL TNLGDINVGD KVNLERAAKF SDEIGGHLMS GHIICTAEIA KIYTSENNRQ 
IWFRMPSEDL MKYVLHKGFI GIDGISLTIG EVVGNRFCVH LIPETLSRTT LGKKRLGHRV 
NIEIDPQTQA VVDTVERVLA QRNMANAALV DEKVVRVS