| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1834 |
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| Symbol | |
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| ID | 6088035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2033946 |
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| End bp | 2034851 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641596902 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001720578 |
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| Protein GI | 170024073 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCAAG TTGGCCTGAG GATTGATGTC GATACCTACC GAGGAACGCA GTACGGGGTG
CCATCATTAC TGACTGTTTT AGAAAAACAT GACATTCGTG CCAGTTTTTT CTTCAGTGTT
GGGCCGGATA ATATGGGACG CCATTTATGG CGCCTTTTTC GTCCGCGCTT TTTATGGAAG
ATGCTACGTT CTAATGCTGC CTCGCTTTAC GGTTGGGATA TTTTACTGGC GGGCACGGCT
TGGCCAGGTA AGAAGATCGC TAAAGACTTT GGTCCGTTAA TGAAAGCAGC GGCCATGGCG
GGGCATGAAG TGGGGTTGCA TGCTTGGGAC CATCAAGGCT GGCAGGCCAA CGTCGCTTCA
TGGTCACAGC AACAACTGAC TGAGCAAGTA CAGAGAGGAG TTGATACTTT ACAGCAGAGT
ATTGGTCAAC CCATTAGCTG TTCTGCTGCT GCGGGGTGGC GCGCCGATGA ACGGGTTCTT
GCGGTAAAAC AGCAATTCGA TTTTAGTTAT AACAGCGATT GCCGGGGGAC CCATCCTTTC
CGGCCTTTGT TGCCTAATGG CAGCTTAGGG AGTGTACAAA TTCCCGTGAC GCTGCCAACT
TACGATGAAG TTGTCGGCGG TGAGGTGCAA GCTGAAAACT TCAATGACTT TATTATTGAC
GCCATCCTAC GTGATAGCGG GGTATCGGTA TACACCATTC ATGCTGAAGT TGAGGGGATG
TCTCAGGCAG CAATGTTTGA GCAGCTCTTG ATGAGAGCAA AGCAACAAGA TATTGAGTTT
TGTCCGCTCA GTAAGCTGCT ACCGTCAGAT TTACAATTAC TGCCTGTGGG CAAAGTAATA
CGCGCTACAT TTCCTGGCCG GGAAGGTTGG TTGGGTTGTC AATCAGACAT AAAGGATGCT
GAATGA
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| Protein sequence | MKQVGLRIDV DTYRGTQYGV PSLLTVLEKH DIRASFFFSV GPDNMGRHLW RLFRPRFLWK
MLRSNAASLY GWDILLAGTA WPGKKIAKDF GPLMKAAAMA GHEVGLHAWD HQGWQANVAS
WSQQQLTEQV QRGVDTLQQS IGQPISCSAA AGWRADERVL AVKQQFDFSY NSDCRGTHPF
RPLLPNGSLG SVQIPVTLPT YDEVVGGEVQ AENFNDFIID AILRDSGVSV YTIHAEVEGM
SQAAMFEQLL MRAKQQDIEF CPLSKLLPSD LQLLPVGKVI RATFPGREGW LGCQSDIKDA
E
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